RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 F8VZ95 297 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 NPIPA3F8WFD2 350 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 SRPX2O60687 465 aaPredicted RBP7.39□□□□□ -1.23
LINC01961-201ENST00000449954 SEC24DO94855 1032 aaPredicted RBP7.39□□□□□ -1.23
LINC01961-201ENST00000449954 F13A1P00488 732 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 HLA-DQB2P05538 268 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 HMGCLP35914 325 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 CYB561P49447 251 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 PRLHRP49683 370 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 TAS2R50P59544 299 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 FMO1Q01740 532 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 RPA4Q13156 261 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 PRKG2Q13237 762 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 MESDQ14696 234 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 HSPB2Q16082 182 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 DPYSL2Q16555 572 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 C10orf62Q5T681 223 aaPredicted RBP7.39□□□□□ -1.23
LINC01961-201ENST00000449954 ZNF585AQ6P3V2 769 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 MON1BQ7L1V2 547 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 DET1Q7L5Y6 550 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 DAAM2Q86T65 1068 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 PHF13Q86YI8 300 aaPredicted RBP7.39□□□□□ -1.23
LINC01961-201ENST00000449954 LILRA3Q8N6C8 439 aaPredicted RBP7.39□□□□□ -1.23
LINC01961-201ENST00000449954 ZFP62Q8NB50 900 aaPredicted RBP7.39□□□□□ -1.23
LINC01961-201ENST00000449954 RELL2Q8NC24 303 aaPredicted RBP7.39□□□□□ -1.23
LINC01961-201ENST00000449954 M1APQ8TC57 530 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 SLC22A18Q96BI1 424 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 ZMYND19Q96E35 227 aaPredicted RBP7.39□□□□□ -1.23
LINC01961-201ENST00000449954 PEBP4Q96S96 227 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 NPAS2Q99743 824 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 ZFYVE21Q9BQ24 234 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 TRIM45Q9H8W5 580 aaPredicted RBP7.39□□□□□ -1.23
LINC01961-201ENST00000449954 MMP25Q9NPA2 562 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 LUC7LQ9NQ29 371 aaKnown RBP7.39□□□□□ -1.23
LINC01961-201ENST00000449954 YAE1D1Q9NRH1 226 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 ETNK2Q9NVF9 386 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 PCSK1NQ9UHG2 260 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 POLG2Q9UHN1 485 aa7.39□□□□□ -1.23
LINC01961-201ENST00000449954 SNRNP200O75643 2136 aaKnown RBP7.39□□□□□ -1.23
LINC01961-201ENST00000449954 NBEAL2Q6ZNJ1 2754 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 GLYATL1P3A0A0U1RQE8 302 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 A8MV72 311 aaPredicted RBP7.38□□□□□ -1.23
LINC01961-201ENST00000449954 ISM1B1AKI9 464 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 RNF8O76064 485 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 PDE9AO76083 593 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 STATHP02808 62 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 MMP2P08253 660 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 ZSCAN22P10073 491 aaPredicted RBP7.38□□□□□ -1.23
LINC01961-201ENST00000449954 GABRA1P14867 456 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 PSMA2P25787 234 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 PTH2RP49190 550 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 BECN1Q14457 450 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 POU4F3Q15319 338 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 SPRED3Q2MJR0 410 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 C1orf185Q5T7R7 199 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 RTL6Q6ICC9 239 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 BEND4Q6ZU67 534 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 CYP4V2Q6ZWL3 525 aaPredicted RBP7.38□□□□□ -1.23
LINC01961-201ENST00000449954 CPEB2Q7Z5Q1 589 aaKnown RBP7.38□□□□□ -1.23
LINC01961-201ENST00000449954 OR5M9Q8NGP3 310 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 PPP1R14CQ8TAE6 165 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 TFGQ92734 400 aaPredicted RBP7.38□□□□□ -1.23
LINC01961-201ENST00000449954 SLCO2A1Q92959 643 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 DACH2Q96NX9 599 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 SMC6Q96SB8 1091 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 PLCD4Q9BRC7 762 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 TRABDQ9H4I3 376 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 COG4Q9H9E3 785 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 VPS37BQ9H9H4 285 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 BPIFA1Q9NP55 256 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 SPTLC3Q9NUV7 552 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 CTNND2Q9UQB3 1225 aa7.38□□□□□ -1.23
LINC01961-201ENST00000449954 EIF3LQ9Y262 564 aaKnown RBP7.38□□□□□ -1.23
LINC01961-201ENST00000449954 ZNF407Q9C0G0 2248 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 LOC100289279A0A1B0GTE1 492 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 ACOT7O00154 380 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 GPR39O43194 453 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 UGT1A9O60656 530 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 SOX30O94993 753 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 FKBP9O95302 570 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 RALBP11234 206 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 UGT1A6P19224 532 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 BMP5P22003 454 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 CCNCP24863 283 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 PEBP1P30086 187 aaKnown RBP7.37□□□□□ -1.23
LINC01961-201ENST00000449954 RFC3P40938 356 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 AGTR2P50052 363 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 VSX2P58304 361 aaPredicted RBP7.37□□□□□ -1.23
LINC01961-201ENST00000449954 OGDHQ02218 1023 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 PCDH1Q08174 1060 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 GALNT2Q10471 571 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 SLC14A2Q15849 920 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 IFI16Q16666 785 aaKnown RBP7.37□□□□□ -1.23
LINC01961-201ENST00000449954 EXOSC6Q5RKV6 272 aaKnown RBP7.37□□□□□ -1.23
LINC01961-201ENST00000449954 WASHC2DQ5SRD0 308 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 CCDC70Q6NSX1 233 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 FAM151BQ6UXP7 276 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 RGS9BPQ6ZS82 235 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 MAATS1Q7Z4T9 603 aa7.37□□□□□ -1.23
LINC01961-201ENST00000449954 POLNQ7Z5Q5 900 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms