RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 CAPN3P20807 821 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 PTX3P26022 381 aaPredicted RBP6.95□□□□□ -1.3
BEST1-202ENST00000449131 PCSK6P29122 969 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 RYKP34925 604 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 CPOXP36551 454 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 C18orf21Q32NC0 220 aaPredicted RBP6.95□□□□□ -1.3
BEST1-202ENST00000449131 DDX60LQ5H9U9 1706 aaKnown RBP6.95□□□□□ -1.3
BEST1-202ENST00000449131 PRAMEF14Q5SWL7 426 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 PRAMEF13Q5VWM6 474 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 PLET1Q6UQ28 207 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 HIST3H2AQ7L7L0 130 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 AKAP14Q86UN6 197 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 LAPTM4BQ86VI4 370 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 RASSF5Q8WWW0 418 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 DNASE1L2Q92874 299 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 HIST1H2ACQ93077 130 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 CMTM7Q96FZ5 175 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 FCRL4Q96PJ5 515 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 KCNS3Q9BQ31 491 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 TTLL2Q9BWV7 592 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 MFRPQ9BY79 579 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 GSTO2Q9H4Y5 243 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 CMTM6Q9NX76 183 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 MTRRQ9UBK8 725 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 DUX4Q9UBX2 424 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 SLCO3A1Q9UIG8 710 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 ERVW-1Q9UQF0 538 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 POLR1DQ9Y2S0 133 aa6.95□□□□□ -1.3
BEST1-202ENST00000449131 ABHD14A-ACY1A0A1B0GW23 586 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 TRBC2A0A5B9 178 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 FAM86C2PA6NEL3 165 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 PLOD2O00469 737 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 PGRMC2O15173 223 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 MPZL2O60487 215 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 PLOD3O60568 738 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 CCNKO75909 580 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 RASGRP1O95267 797 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 VIPP01282 170 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 C9P02748 559 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 STATHP02808 62 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 FYNP06241 537 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 IGFBP4P22692 258 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 MYL9P24844 172 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 HTR1EP28566 365 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 CMPK1P30085 196 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 TAS2R50P59544 299 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 DSTNP60981 165 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 VBP1P61758 197 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 PRR5P85299 388 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 CDK6Q00534 326 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 LMAN2Q12907 356 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 LARS2Q15031 903 aaKnown RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 ATP6AP1Q15904 470 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 CYP27C1Q4G0S4 372 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 IQCCQ4KMZ1 466 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 SPIN4Q56A73 249 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 CCDC80Q76M96 950 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 BEND5Q7L4P6 421 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 SIX5Q8N196 739 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 MZB1Q8WU39 189 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 KHSRPQ92945 711 aaKnown RBP eCLIP6.94□□□□□ -1.3
BEST1-202ENST00000449131 TP53INP1Q96A56 240 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 FUBP1Q96AE4 644 aaKnown RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 POLR2J2Q9GZM3 115 aaKnown RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 NAA50Q9GZZ1 169 aaKnown RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 THUMPD1Q9NXG2 353 aaKnown RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 MRPL39Q9NYK5 338 aaKnown RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 PCDHGA7Q9Y5G6 932 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 FAM240BA0A1B0GVZ2 78 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 DENRO43583 198 aaKnown RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 NDUFB5O43674 189 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 LDB2O43679 373 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 SOCS5O75159 536 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 ZNF30P17039 623 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 CLCNKAP51800 687 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 FOXA1P55317 472 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 SEC13P55735 322 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 FAM189BP81408 668 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 MEF2AQ02078 507 aaPredicted RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 IL18R1Q13478 541 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 RAB39AQ14964 217 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 TEAD2Q15562 447 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 MORN1Q5T089 497 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 TMEM236Q5W0B7 351 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 NOXRED1Q6NXP6 359 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 CNKSR3Q6P9H4 555 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 ZNF773Q6PK81 442 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 UGT2A3Q6UWM9 527 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 KRT74Q7RTS7 529 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 PIWIL3Q7Z3Z3 882 aaKnown RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 TICAM1Q8IUC6 712 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 NPAS3Q8IXF0 933 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 REM2Q8IYK8 340 aaPredicted RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 FAM98AQ8NCA5 519 aaKnown RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 NFKBIDQ8NI38 313 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 IPCEF1Q8WWN9 437 aaPredicted RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 L3HYPDHQ96EM0 354 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 ZNF641Q96N77 438 aaPredicted RBP6.94□□□□□ -1.3
BEST1-202ENST00000449131 BOCQ9BWV1 1114 aa6.94□□□□□ -1.3
BEST1-202ENST00000449131 SNTG1Q9NSN8 517 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms