RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 NCF1BA6NI72 391 aaPredicted RBP13.92□□□□□ -0.18
USP39-206ENST00000448971 NCF1CA8MVU1 366 aaPredicted RBP13.92□□□□□ -0.18
USP39-206ENST00000448971 HAT1O14929 419 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 INHBAP08476 426 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 CCDC166P0CW27 439 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 NCF1P14598 390 aaPredicted RBP13.92□□□□□ -0.18
USP39-206ENST00000448971 ALAS2P22557 587 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 MLLT10P55197 1068 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 ERV3-1Q14264 604 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 CSHL1Q14406 222 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 ZKSCAN8Q15776 578 aaPredicted RBP13.92□□□□□ -0.18
USP39-206ENST00000448971 ZNF425Q6IV72 752 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 LCTLQ6UWM7 567 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 TTLL10Q6ZVT0 673 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 TAOK1Q7L7X3 1001 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 TBC1D1Q86TI0 1168 aaPredicted RBP13.92□□□□□ -0.18
USP39-206ENST00000448971 SPATA6LQ8N4H0 392 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 ANKRD7Q92527 254 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 EXT2Q93063 718 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 RERGQ96A58 199 aaPredicted RBP13.92□□□□□ -0.18
USP39-206ENST00000448971 C17orf62Q9BQA9 187 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 HAUS8Q9BT25 410 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 GPR87Q9BY21 358 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 L2HGDHQ9H9P8 463 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 CUTCQ9NTM9 273 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 GPN3Q9UHW5 284 aaPredicted RBP13.92□□□□□ -0.18
USP39-206ENST00000448971 PADI2Q9Y2J8 665 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 OARD1Q9Y530 152 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 PCDHGA6Q9Y5G7 932 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 IKBKGQ9Y6K9 419 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 HIVEP3Q5T1R4 2406 aa13.92□□□□□ -0.18
USP39-206ENST00000448971 SNRNP200O75643 2136 aaKnown RBP13.91□□□□□ -0.18
USP39-206ENST00000448971 LOC105369274A0A096LPK9 316 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 LOC102723532A0A0G2JNH3 316 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 H7BY64 318 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 SRPX2O60687 465 aaPredicted RBP13.91□□□□□ -0.18
USP39-206ENST00000448971 CREG1O75629 220 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 CDH1P12830 882 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 HRH2P25021 359 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 PTPN4P29074 926 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 ATP6V0D1P61421 351 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 DCDP81605 110 aaKnown RBP13.91□□□□□ -0.18
USP39-206ENST00000448971 NCF4Q15080 339 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 WASHC2DQ5SRD0 308 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 MROH9Q5TGP6 573 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 YOD1Q5VVQ6 348 aaPredicted RBP13.91□□□□□ -0.18
USP39-206ENST00000448971 ZNF385CQ66K41 422 aaPredicted RBP13.91□□□□□ -0.18
USP39-206ENST00000448971 LCN10Q6JVE6 187 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 ZNF517Q6ZMY9 492 aaPredicted RBP13.91□□□□□ -0.18
USP39-206ENST00000448971 SYVN1Q86TM6 617 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 PLD3Q8IV08 490 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 GSPT2Q8IYD1 628 aaKnown RBP13.91□□□□□ -0.18
USP39-206ENST00000448971 OR4N4Q8N0Y3 316 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 METTL27Q8N6F8 245 aaPredicted RBP13.91□□□□□ -0.18
USP39-206ENST00000448971 CSNK1A1LQ8N752 337 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 UHMK1Q8TAS1 419 aaKnown RBP13.91□□□□□ -0.18
USP39-206ENST00000448971 CABS1Q96KC9 395 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 PRAP1Q96NZ9 151 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 GBP5Q96PP8 586 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 SGPP1Q9BX95 441 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 WWOXQ9NZC7 414 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 IFT80Q9P2H3 777 aaPredicted RBP13.91□□□□□ -0.18
USP39-206ENST00000448971 SH2B3Q9UQQ2 575 aa13.91□□□□□ -0.18
USP39-206ENST00000448971 FARSAQ9Y285 508 aaKnown RBP13.91□□□□□ -0.18
USP39-206ENST00000448971 A0A087WUV0 522 aaPredicted RBP13.9□□□□□ -0.18
USP39-206ENST00000448971 H0YGG7 62 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 DSCR3O14972 297 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 WISP3O95389 354 aaPredicted RBP13.9□□□□□ -0.18
USP39-206ENST00000448971 S100BP04271 92 aaPredicted RBP13.9□□□□□ -0.18
USP39-206ENST00000448971 RAB40ALP0C0E4 278 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 SLC35E2BP0CK96 405 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 CD1DP15813 335 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 CRABP2P29373 138 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 GRK3P35626 688 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 SERPINB8P50452 374 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 ARF3P61204 181 aaPredicted RBP13.9□□□□□ -0.18
USP39-206ENST00000448971 CDKL1Q00532 357 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 MLIPQ5VWP3 458 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 HIST2H2BCQ6DN03 193 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 TEX19Q8NA77 164 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 OR56A3Q8NH54 315 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 TSNARE1Q96NA8 513 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 ZNF285Q96NJ3 590 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 PAFAH2Q99487 392 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 DHRS4Q9BTZ2 278 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 NLNQ9BYT8 704 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 SNX15Q9NRS6 342 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 TMEM184CQ9NVA4 438 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 RNF112Q9ULX5 631 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 DYRK1BQ9Y463 629 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 SHANK1Q9Y566 2161 aa13.9□□□□□ -0.18
USP39-206ENST00000448971 SEC16AO15027 2179 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 EXOC1LA0A1B0GW35 172 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 HYKKA2RU49 373 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 FITM1A5D6W6 292 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 POC1B-GALNT4F8VUJ3 575 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 MKRN2OSH3BPM6 223 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 WDR47O94967 919 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 RECKO95980 971 aa13.89□□□□□ -0.19
USP39-206ENST00000448971 PDGFAP04085 211 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms