RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 KIAA0355O15063 1070 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 DLX3O60479 287 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 PLOD3O60568 738 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 ANXA6P08133 673 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 NMBP08949 121 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 CYP4B1P13584 511 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 RPS2P15880 293 aaKnown RBP10.43□□□□□ -0.74
LINC00342-202ENST00000448494 STOMP27105 288 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 LAP3P28838 519 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 NR0B1P51843 470 aaKnown RBP10.43□□□□□ -0.74
LINC00342-202ENST00000448494 EPHA4P54764 986 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 C1QTNF8P60827 252 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 PTPN11Q06124 597 aaPredicted RBP10.43□□□□□ -0.74
LINC00342-202ENST00000448494 OR2B11Q5JQS5 317 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 SPOUT1Q5T280 376 aaKnown RBP10.43□□□□□ -0.74
LINC00342-202ENST00000448494 IL31Q6EBC2 164 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 HHIPL2Q6UWX4 724 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 ZPBP2Q6X784 338 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 KIAA0907Q7Z7F0 614 aaPredicted RBP10.43□□□□□ -0.74
LINC00342-202ENST00000448494 DDX53Q86TM3 631 aaKnown RBP10.43□□□□□ -0.74
LINC00342-202ENST00000448494 ABI1Q8IZP0 508 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 OXR1Q8N573 874 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 WDSUB1Q8N9V3 476 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 RNASE11Q8TAA1 199 aaKnown RBP10.43□□□□□ -0.74
LINC00342-202ENST00000448494 GPR152Q8TDT2 470 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 OTULINQ96BN8 352 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 CRELD1Q96HD1 420 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 KCNA7Q96RP8 456 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 PFDN5Q99471 154 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 CCM2Q9BSQ5 444 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 HTATIP2Q9BUP3 242 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 SEMA4CQ9C0C4 833 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 ACTR6Q9GZN1 396 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 DDX31Q9H8H2 851 aaKnown RBP10.43□□□□□ -0.74
LINC00342-202ENST00000448494 SLC22A11Q9NSA0 550 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 NSMCE4AQ9NXX6 385 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 BTG4Q9NY30 223 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 XPR1Q9UBH6 696 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 AASSQ9UDR5 926 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 CYTH4Q9UIA0 394 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 STUB1Q9UNE7 303 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 PCDHGB7Q9Y5F8 929 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 CLCA3PQ9Y6N3 262 aa10.43□□□□□ -0.74
LINC00342-202ENST00000448494 TP53BP1Q12888 1972 aaPredicted RBP10.42□□□□□ -0.74
LINC00342-202ENST00000448494 DOT1LQ8TEK3 1739 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 TRAV19A0A0A6YYK7 116 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 LYRM1O43325 122 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 RB1P06400 928 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 ADRB2P07550 413 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 CFHP08603 1231 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 CHRM5P08912 532 aaPredicted RBP10.42□□□□□ -0.74
LINC00342-202ENST00000448494 ERVK-10P10266 1014 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 MYCLP12524 364 aaPredicted RBP10.42□□□□□ -0.74
LINC00342-202ENST00000448494 ZNF8P17098 575 aaPredicted RBP10.42□□□□□ -0.74
LINC00342-202ENST00000448494 HOXB6P17509 224 aaKnown RBP10.42□□□□□ -0.74
LINC00342-202ENST00000448494 DDX6P26196 483 aaKnown RBP eCLIP10.42□□□□□ -0.74
LINC00342-202ENST00000448494 YWHABP31946 246 aaKnown RBP10.42□□□□□ -0.74
LINC00342-202ENST00000448494 DCTP40126 519 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 CSRP3P50461 194 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 DSC2Q02487 901 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 SOX4Q06945 474 aaPredicted RBP10.42□□□□□ -0.74
LINC00342-202ENST00000448494 SLC3A1Q07837 685 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 NFYCQ13952 458 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 ZNF284Q2VY69 593 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 SPANXN3Q5MJ09 141 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 MLIPQ5VWP3 458 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 KANK2Q63ZY3 851 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 ESRP1Q6NXG1 681 aaKnown RBP10.42□□□□□ -0.74
LINC00342-202ENST00000448494 HS3ST5Q8IZT8 346 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 MIER2Q8N344 545 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.42□□□□□ -0.74
LINC00342-202ENST00000448494 NARS2Q96I59 477 aaKnown RBP10.42□□□□□ -0.74
LINC00342-202ENST00000448494 CXorf58Q96LI9 332 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 LURAP1Q96LR2 239 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 PPP1R16BQ96T49 567 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 H2AFJQ9BTM1 129 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 FAM126AQ9BYI3 521 aaPredicted RBP10.42□□□□□ -0.74
LINC00342-202ENST00000448494 ZDHHC4Q9NPG8 344 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 CASS4Q9NQ75 786 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 TREM2Q9NZC2 230 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 NLKQ9UBE8 527 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 FBXL2Q9UKC9 423 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 SLX4Q8IY92 1834 aa10.42□□□□□ -0.74
LINC00342-202ENST00000448494 ANKDD1BA6NHY2 528 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 GLUD1P00367 558 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 CYP17A1P05093 508 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 LPLP06858 475 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 TSPAN19P0C672 248 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 APEHP13798 732 aaKnown RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 PHKG2P15735 406 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 TPH1P17752 444 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 PAICSP22234 425 aaKnown RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 WARSP23381 471 aaKnown RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 IGFBP5P24593 272 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 FPR3P25089 353 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 ATP5A1P25705 553 aaKnown RBP10.41□□□□□ -0.74
LINC00342-202ENST00000448494 GNA15P30679 374 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 KCNJ3P48549 501 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 KCNJ10P78508 379 aa10.41□□□□□ -0.74
LINC00342-202ENST00000448494 POU4F1Q01851 419 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms