RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ABRAXAS1Q6UWZ7 409 aa14.29□□□□□ -0.12
SF1-211ENST00000448404 DPPA4Q7L190 304 aa14.29□□□□□ -0.12
SF1-211ENST00000448404 ZNF554Q86TJ5 538 aa14.29□□□□□ -0.12
SF1-211ENST00000448404 CNIH3Q8TBE1 160 aa14.29□□□□□ -0.12
SF1-211ENST00000448404 LZICQ8WZA0 190 aa14.29□□□□□ -0.12
SF1-211ENST00000448404 CCM2Q9BSQ5 444 aa14.29□□□□□ -0.12
SF1-211ENST00000448404 YIPF2Q9BWQ6 316 aa14.29□□□□□ -0.12
SF1-211ENST00000448404 NPLQ9BXD5 320 aaPredicted RBP14.29□□□□□ -0.12
SF1-211ENST00000448404 ING2Q9H160 280 aa14.29□□□□□ -0.12
SF1-211ENST00000448404 AASDHPPTQ9NRN7 309 aa14.29□□□□□ -0.12
SF1-211ENST00000448404 TBC1D14Q9P2M4 693 aa14.29□□□□□ -0.12
SF1-211ENST00000448404 RSL24D1Q9UHA3 163 aaKnown RBP14.29□□□□□ -0.12
SF1-211ENST00000448404 EXO1Q9UQ84 846 aaKnown RBP14.29□□□□□ -0.12
SF1-211ENST00000448404 PCM1Q15154 2024 aa14.29□□□□□ -0.12
SF1-211ENST00000448404 XPNPEP2O43895 674 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 ATE1O95260 518 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 NPPAP01160 153 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 MPC1LP0DKB6 136 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 PSMB5P28074 263 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 DCTP40126 519 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 HNMTP50135 292 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 ALDH3A2P51648 485 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 DGKEP52429 567 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 EMP3P54852 163 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 COX20Q5RI15 118 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 PATL1Q86TB9 770 aaKnown RBP14.28□□□□□ -0.12
SF1-211ENST00000448404 PLD3Q8IV08 490 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 TMEM132CQ8N3T6 1108 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 GLB1L3Q8NCI6 653 aaPredicted RBP14.28□□□□□ -0.12
SF1-211ENST00000448404 OR5AR1Q8NGP9 310 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 FBXL8Q96CD0 374 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 GORASP2Q9H8Y8 452 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 PRDM8Q9NQV8 689 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 ZNF639Q9UID6 485 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 LRRK1Q38SD2 2015 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 A0A096LPI6 279 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 A0A0G2JN53 185 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 BOLA2-SMG1P6H3BVE0 249 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 RFXAPO00287 272 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 TRMUO75648 421 aaKnown RBP14.28□□□□□ -0.12
SF1-211ENST00000448404 HOXB9P17482 250 aaPredicted RBP14.28□□□□□ -0.12
SF1-211ENST00000448404 DCTN2Q13561 401 aaKnown RBP14.28□□□□□ -0.12
SF1-211ENST00000448404 SLBPQ14493 270 aaKnown RBP eCLIP14.28□□□□□ -0.12
SF1-211ENST00000448404 ZNF234Q14588 700 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 RAB39AQ14964 217 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 GAB4Q2WGN9 574 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 Q6ZPB1 254 aaPredicted RBP14.28□□□□□ -0.12
SF1-211ENST00000448404 ARMCX6Q7L4S7 300 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 CHPFQ8IZ52 775 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 PACRGLQ8N7B6 248 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 HAUS8Q9BT25 410 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 TRIM39Q9HCM9 518 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 NINQ8N4C6 2090 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 HELZP42694 1942 aaKnown RBP14.28□□□□□ -0.12
SF1-211ENST00000448404 DYTNA2CJ06 578 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 TBC1D3BA6NDS4 549 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 XYLBO75191 536 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 POP7O75817 140 aaKnown RBP14.28□□□□□ -0.12
SF1-211ENST00000448404 FKBP9O95302 570 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 C1orf105O95561 183 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 PBX2P40425 430 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 HNF4AP41235 474 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 SOX9P48436 509 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 NRIP1P48552 1158 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 PRLHRP49683 370 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 CRYBA2P53672 197 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 PTPN5P54829 565 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 TPD52P55327 224 aaPredicted RBP14.28□□□□□ -0.12
SF1-211ENST00000448404 C9orf50Q5SZB4 431 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 ERAP2Q6P179 960 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 FKBP9P1Q75LS8 142 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 R3HCC1LQ7Z5L2 792 aaKnown RBP14.28□□□□□ -0.12
SF1-211ENST00000448404 GPR149Q86SP6 731 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 CYP4Z1Q86W10 505 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 CALHM3Q86XJ0 350 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 PTOV1Q86YD1 416 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 PLPP6Q8IY26 295 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 BPIFB6Q8NFQ5 453 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 C12orf43Q96C57 262 aaKnown RBP14.28□□□□□ -0.12
SF1-211ENST00000448404 DTD2Q96FN9 168 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 ABCG4Q9H172 646 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 SLC6A17Q9H1V8 727 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 EPB41L1Q9H4G0 881 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 HCN2Q9UL51 889 aa14.28□□□□□ -0.12
SF1-211ENST00000448404 PNMA8BQ9ULN7 279 aaPredicted RBP14.28□□□□□ -0.12
SF1-211ENST00000448404 PRAMEF33A0A0G2JMD5 474 aa14.27□□□□□ -0.12
SF1-211ENST00000448404 A0A1W2PPW3 197 aa14.27□□□□□ -0.12
SF1-211ENST00000448404 WASHC1A8K0Z3 465 aa14.27□□□□□ -0.12
SF1-211ENST00000448404 PCDH7O60245 1069 aa14.27□□□□□ -0.12
SF1-211ENST00000448404 EFCAB14O75071 495 aa14.27□□□□□ -0.12
SF1-211ENST00000448404 KCNK5O95279 499 aa14.27□□□□□ -0.12
SF1-211ENST00000448404 CATP04040 527 aaKnown RBP14.27□□□□□ -0.12
SF1-211ENST00000448404 NPPBP16860 134 aa14.27□□□□□ -0.12
SF1-211ENST00000448404 IL12RB1P42701 662 aa14.27□□□□□ -0.12
SF1-211ENST00000448404 OR1E2P47887 323 aa14.27□□□□□ -0.12
SF1-211ENST00000448404 AP1S2P56377 157 aa14.27□□□□□ -0.12
SF1-211ENST00000448404 ADRM1Q16186 407 aa14.27□□□□□ -0.12
SF1-211ENST00000448404 LRIF1Q5T3J3 769 aa14.27□□□□□ -0.12
SF1-211ENST00000448404 LAIR2Q6ISS4 152 aa14.27□□□□□ -0.12
SF1-211ENST00000448404 KLHL35Q6PF15 583 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms