RNA–Protein interactions for RNA: ENST00000448217.2

SCAP-208, Transcript of SREBF chaperone, human

TSL 4

Gene SCAP, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-208	ENST00000448217	RFWD2	Q8NHY2	731 aa		11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	BCAS4	Q8TDM0	211 aa		11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	ZNF473	Q8WTR7	871 aa	Known RBP	11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	THAP11	Q96EK4	314 aa		11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	C19orf60	Q96EN9	201 aa		11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	ZDHHC12	Q96GR4	267 aa		11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	METTL2A	Q96IZ6	378 aa	Known RBP	11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	PRAP1	Q96NZ9	151 aa		11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	ELAC2	Q9BQ52	826 aa	Known RBP	11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	CCDC28B	Q9BUN5	200 aa		11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	SPNS1	Q9H2V7	528 aa		11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	SEMA6C	Q9H3T2	930 aa		11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	BRF2	Q9HAW0	419 aa		11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	ENAM	Q9NRM1	1142 aa		11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	ABCF3	Q9NUQ8	709 aa		11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	FAM86C1	Q9NVL1	165 aa		11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	PILRA	Q9UKJ1	303 aa		11.44	□□□□□ -0.58
SCAP-208	ENST00000448217	WDR87	Q6ZQQ6	2873 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	FRYL	O94915	3013 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	PCNX2	A6NKB5	2137 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	SLC28A1	O00337	649 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	NDUFAB1	O14561	156 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	PIP5K1B	O14986	540 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	CAPN5	O15484	640 aa	Predicted RBP	11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	LDOC1	O95751	146 aa	Predicted RBP	11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	JUN	P05412	331 aa	Known RBP	11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	PRR35	P0CG20	571 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	EZR	P15311	586 aa	Known RBP	11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	SERPINB3	P29508	390 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	ALDH4A1	P30038	563 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	GRK3	P35626	688 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	ARL1	P40616	181 aa	Predicted RBP	11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	LSS	P48449	732 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	IDH3A	P50213	366 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	HTR6	P50406	440 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	ARFIP2	P53365	341 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	LIMK1	P53667	647 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	RPS15A	P62244	130 aa	Known RBP	11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	IRX1	P78414	480 aa	Predicted RBP	11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	CFHR1	Q03591	330 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	IFT88	Q13099	833 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	ABRAXAS2	Q15018	415 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	TERF2	Q15554	542 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	TCHHL1	Q5QJ38	904 aa	Predicted RBP	11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	PERM1	Q5SV97	790 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	METTL21C	Q5VZV1	264 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	FCRL6	Q6DN72	434 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	OGFOD2	Q6N063	350 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	FIGLA	Q6QHK4	219 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217		Q6ZSR9	355 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	LARP4	Q71RC2	724 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	PRSS42	Q7Z5A4	293 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	KMT5C	Q86Y97	462 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	TBC1D19	Q8N5T2	526 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	MFSD9	Q8NBP5	474 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	WDR48	Q8TAF3	677 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	AGR3	Q8TD06	166 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	CNDP2	Q96KP4	475 aa	Known RBP	11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	TRAPPC9	Q96Q05	1148 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	CCDC3	Q9BQI4	270 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	NUF2	Q9BZD4	464 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	FAM107B	Q9H098	131 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	ELOVL6	Q9H5J4	265 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	RXFP3	Q9NSD7	469 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	ARL2BP	Q9Y2Y0	163 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	USP34	Q70CQ2	3546 aa		11.43	□□□□□ -0.58
SCAP-208	ENST00000448217	RIF1	Q5UIP0	2472 aa	Known RBP	11.43	□□□□□ -0.58
SCAP-208	ENST00000448217		A0A0G2JND7	137 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217		A0A1W2PQM1	296 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	CPED1	A4D0V7	1026 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	NTN3	O00634	580 aa	Predicted RBP	11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	FFAR3	O14843	346 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	GPR42	O15529	346 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	CLEC3A	O75596	197 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	RSL1D1	O76021	490 aa	Known RBP	11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	CPNE6	O95741	557 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	PDYN	P01213	254 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	ANKRD34C	P0C6C1	535 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	MSL3P1	P0C860	447 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	MYF5	P13349	255 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	PCSK2	P16519	638 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	MAG	P20916	626 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	CSF2RB	P32927	897 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	ARFIP1	P53367	373 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	PPP1CA	P62136	330 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	DAB2	P98082	770 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	ILK	Q13418	452 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	TUBB3	Q13509	450 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	PDCD2	Q16342	344 aa	Predicted RBP	11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	SLC9B1	Q4ZJI4	515 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	FBXO42	Q6P3S6	717 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	TMEM71	Q6P5X7	295 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	RNF44	Q7L0R7	432 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	VN1R5	Q7Z5H4	357 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	PIP4P1	Q86T03	277 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	TRIM73	Q86UV7	250 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	MYLK4	Q86YV6	388 aa	Predicted RBP	11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	NAXD	Q8IW45	347 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	ANKRD53	Q8N9V6	530 aa		11.42	□□□□□ -0.58
SCAP-208	ENST00000448217	ZNF740	Q8NDX6	193 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms