RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 VWA2Q5GFL6 755 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 GRTP1Q5TC63 336 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 FAM69BQ5VUD6 431 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 Q6ZS92 163 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 CDH24Q86UP0 819 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 CUZD1Q86UP6 607 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 CEP97Q8IW35 865 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 CTAGE3PQ8IX95 158 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 FAM20CQ8IXL6 584 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 ZNF295-AS1Q8N0V1 137 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 MYO1HQ8N1T3 1032 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 ZADH2Q8N4Q0 377 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 DNAJC22Q8N4W6 341 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 PPM1NQ8N819 430 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 C19orf47Q8N9M1 422 aaKnown RBP11.91□□□□□ -0.5
SSR4-205ENST00000447375 MCOLN3Q8TDD5 553 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 ZNF480Q8WV37 535 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 SMPDL3AQ92484 453 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 ANKRD7Q92527 254 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 ZUFSPQ96AP4 578 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 GPR22Q99680 433 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 FUT8Q9BYC5 575 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 CHST8Q9H2A9 424 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 POPDC3Q9HBV1 291 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 NINJ2Q9NZG7 142 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 ADAMTS6Q9UKP5 1117 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 TCFL5Q9UL49 500 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 PDE10AQ9Y233 779 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 POLEQ07864 2286 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 NUP210LQ5VU65 1888 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 MTORP42345 2549 aa11.91□□□□□ -0.5
SSR4-205ENST00000447375 ZNF839A8K0R7 811 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 TARM1B6A8C7 271 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 E7ENX8 843 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 E2F3O00716 465 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 WISP3O95389 354 aaPredicted RBP11.9□□□□□ -0.5
SSR4-205ENST00000447375 KLK3P07288 261 aaPredicted RBP11.9□□□□□ -0.5
SSR4-205ENST00000447375 RAB40ALP0C0E4 278 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 ZNF37AP17032 561 aaPredicted RBP11.9□□□□□ -0.5
SSR4-205ENST00000447375 CYP2A7P20853 494 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 SAT1P21673 171 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 PHBP35232 272 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 SPRP35270 261 aaPredicted RBP11.9□□□□□ -0.5
SSR4-205ENST00000447375 KRTAP10-9P60411 292 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 TAP2Q03519 686 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 GPS2Q13227 327 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 ATP1A4Q13733 1029 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 ZNF630Q2M218 657 aaPredicted RBP11.9□□□□□ -0.5
SSR4-205ENST00000447375 FIGLAQ6QHK4 219 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 TAX1BP1Q86VP1 789 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 PARP9Q8IXQ6 854 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 LRRC56Q8IYG6 542 aaPredicted RBP11.9□□□□□ -0.5
SSR4-205ENST00000447375 NKAPQ8N5F7 415 aaKnown RBP11.9□□□□□ -0.5
SSR4-205ENST00000447375 LRRN4CLQ8ND94 238 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 OR2L3Q8NG85 312 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 ITLN2Q8WWU7 325 aaPredicted RBP11.9□□□□□ -0.5
SSR4-205ENST00000447375 TM9SF4Q92544 642 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 CCDC138Q96M89 665 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 FANCEQ9HB96 536 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 INTS7Q9NVH2 962 aaKnown RBP11.9□□□□□ -0.5
SSR4-205ENST00000447375 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.9□□□□□ -0.5
SSR4-205ENST00000447375 SERTAD3Q9UJW9 196 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 NFU1Q9UMS0 254 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 KLHL20Q9Y2M5 609 aa11.9□□□□□ -0.5
SSR4-205ENST00000447375 DOCK10Q96BY6 2186 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 NAV3Q8IVL0 2385 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 H3BMH7 237 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 HCRTR1O43613 425 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 KLHL41O60662 606 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 SCRG1O75711 98 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 FAM155BO75949 473 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 SYF2O95926 243 aaKnown RBP11.89□□□□□ -0.51
SSR4-205ENST00000447375 RHOXF2BP0C7M4 288 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 MAGP20916 626 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 PSMB5P28074 263 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 IMPA1P29218 277 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 SSTR2P30874 369 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 GRIA3P42263 894 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 SLC12A2P55011 1212 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 PRDX1Q06830 199 aaKnown RBP11.89□□□□□ -0.51
SSR4-205ENST00000447375 USP10Q14694 798 aaKnown RBP11.89□□□□□ -0.51
SSR4-205ENST00000447375 PHKG1Q16816 387 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 FCRL6Q6DN72 434 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 LCN10Q6JVE6 187 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 SUSD1Q6UWL2 747 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 BNC2Q6ZN30 1099 aaPredicted RBP11.89□□□□□ -0.51
SSR4-205ENST00000447375 TMEM126BQ8IUX1 230 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 SYTL1Q8IYJ3 562 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 EIF1ADQ8N9N8 165 aaKnown RBP11.89□□□□□ -0.51
SSR4-205ENST00000447375 OR1L3Q8NH93 324 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 GRHL3Q8TE85 626 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 ANKRD49Q8WVL7 239 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 RELTQ969Z4 430 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 TSPAN17Q96FV3 270 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 CYTH2Q99418 400 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 MIPEPQ99797 713 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 RHOXF2Q9BQY4 288 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 NLNQ9BYT8 704 aa11.89□□□□□ -0.51
SSR4-205ENST00000447375 CDC42EP4Q9H3Q1 356 aaKnown RBP11.89□□□□□ -0.51
SSR4-205ENST00000447375 ACSS3Q9H6R3 686 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms