RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 AP4B1Q9Y6B7 739 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 ALS2Q96Q42 1657 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 hCG_2014768A0A024R1R8 64 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 COCHO43405 550 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 TRAPPC6AO75865 159 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF8P17098 575 aaPredicted RBP8.31□□□□□ -1.08
PTPN3-204ENST00000446349 DRD4P21917 467 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 MZT1Q08AG7 82 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 GRM7Q14831 915 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 PRRT3Q5FWE3 981 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 ZDHHC21Q8IVQ6 265 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 YTHDF1Q9BYJ9 559 aaKnown RBP8.31□□□□□ -1.08
PTPN3-204ENST00000446349 PRTFDC1Q9NRG1 225 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 HRASLS2Q9NWW9 162 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 N4BP2Q86UW6 1770 aaPredicted RBP8.31□□□□□ -1.08
PTPN3-204ENST00000446349 ADAMTS3O15072 1205 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 GADD45AP24522 165 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 KCNJ5P48544 419 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 STARP49675 285 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 DCTN2Q13561 401 aaKnown RBP8.31□□□□□ -1.08
PTPN3-204ENST00000446349 METTL2BQ6P1Q9 378 aaKnown RBP8.31□□□□□ -1.08
PTPN3-204ENST00000446349 NANOGNBQ7Z5D8 188 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 GPAT4Q86UL3 456 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 SLC39A3Q9BRY0 314 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF670-ZNF695F2Z2N8 137 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 CPNE3O75131 537 aaKnown RBP8.3□□□□□ -1.08
PTPN3-204ENST00000446349 AHCYP23526 432 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 VEGFBP49765 207 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 STC1P52823 247 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 SERTAD2Q14140 314 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 TRAM1Q15629 374 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 MPP7Q5T2T1 576 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 NANOS1Q8WY41 292 aaKnown RBP8.3□□□□□ -1.08
PTPN3-204ENST00000446349 CD180Q99467 661 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 PITHD1Q9GZP4 211 aaPredicted RBP8.3□□□□□ -1.08
PTPN3-204ENST00000446349 MAST2Q6P0Q8 1798 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 PRAMEF26H0Y7S4 382 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 MAP3K8P41279 467 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 SLC15A1P46059 708 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 TCEAL8Q8IYN2 117 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 SPATA6LQ8N4H0 392 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 NAT8LQ8N9F0 302 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 OR2L5Q8NG80 312 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 FIBINQ8TAL6 211 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 FAM3CQ92520 227 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 ZFR2Q9UPR6 939 aaKnown RBP8.3□□□□□ -1.08
PTPN3-204ENST00000446349 FADS3Q9Y5Q0 445 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 METTL21EPA6NDL7 271 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 PIP5K1BO14986 540 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF763Q0D2J5 394 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 LRP8Q14114 963 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 AGTRAPQ6RW13 159 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 CHRDL2Q6WN34 429 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 TIFABQ6ZNK6 161 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 CLHC1Q8NHS4 586 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 CCDC107Q8WV48 283 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 ISG20Q96AZ6 181 aaKnown RBP8.3□□□□□ -1.08
PTPN3-204ENST00000446349 KXD1Q9BQD3 176 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 CD244Q9BZW8 370 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 MRPS7Q9Y2R9 242 aaKnown RBP8.3□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF451Q9Y4E5 1061 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 TIMM22Q9Y584 194 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 ANKRD12Q6UB98 2062 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 C9IYK1 514 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 M0R2N6 131 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 SEMA4FO95754 770 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 JUNDP17535 347 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 ADAM8P78325 824 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 CST6Q15828 149 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 TMPPEQ6ZT21 453 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 ASPGQ86U10 573 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 SLC15A3Q8IY34 581 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 NMD3Q96D46 503 aaKnown RBP8.3□□□□□ -1.08
PTPN3-204ENST00000446349 DGCR14Q96DF8 476 aaKnown RBP8.3□□□□□ -1.08
PTPN3-204ENST00000446349 NEDD4LQ96PU5 975 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 GPR22Q99680 433 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 NPAS2Q99743 824 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 RC3H2Q9HBD1 1191 aaKnown RBP8.3□□□□□ -1.08
PTPN3-204ENST00000446349 DRD2P14416 443 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 ATP4BP51164 291 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 RBBP4Q09028 425 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 SCAPQ12770 1279 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 HPS6Q86YV9 775 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 KLHL36Q8N4N3 616 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 OR4E2Q8NGC2 313 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 DEFB126Q9BYW3 111 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 APOBEC3BQ9UH17 382 aaKnown RBP8.3□□□□□ -1.08
PTPN3-204ENST00000446349 TAC3Q9UHF0 121 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 FESP07332 822 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 PUM1Q14671 1186 aaKnown RBP eCLIP8.3□□□□□ -1.08
PTPN3-204ENST00000446349 DHCR24Q15392 516 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 ABHD12BQ7Z5M8 362 aaPredicted RBP8.3□□□□□ -1.08
PTPN3-204ENST00000446349 ALDH16A1Q8IZ83 802 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 GSTCDQ8NEC7 633 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 RHEBL1Q8TAI7 183 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 SMPDL3BQ92485 455 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 OXSMQ9NWU1 459 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 PLCL2Q9UPR0 1127 aa8.3□□□□□ -1.08
PTPN3-204ENST00000446349 FOXD2O60548 495 aaPredicted RBP8.3□□□□□ -1.08
PTPN3-204ENST00000446349 CLUP10909 449 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms