RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 TNFSF8P32971 234 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 DCTP40126 519 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 KCNQ1P51787 676 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 CLCN4P51793 760 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 MANFP55145 182 aaKnown RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 LRRN3Q9H3W5 708 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 PCDHGB1Q9Y5G3 927 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 C1orf196B1AJZ1 125 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 IFNGP01579 166 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 RHOAP61586 193 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 C4orf46Q504U0 113 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 RFTN2Q52LD8 501 aaPredicted RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 NSUN5Q96P11 429 aaKnown RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 PRDM8Q9NQV8 689 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 GRIK4Q16099 956 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 C20orf27Q9GZN8 174 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 PKDREJQ9NTG1 2253 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 HOXC11O43248 304 aaPredicted RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 WDPCPO95876 746 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 AXLP30530 894 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 ABHD18Q0P651 414 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 HSF5Q4G112 596 aaPredicted RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 GALNT13Q8IUC8 556 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 ANKRD53Q8N9V6 530 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 GPRC5AQ8NFJ5 357 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 CNOT9Q92600 299 aaKnown RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 ZNF599Q96NL3 588 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 DHRS9Q9BPW9 319 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 OSBPL2Q9H1P3 480 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 ZNF304Q9HCX3 659 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 GALPQ9UBC7 116 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 PTCH2Q9Y6C5 1203 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 MEGF6O75095 1541 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 SOX3P41225 446 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 C6orf136Q5SQH8 315 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 THAP6Q8TBB0 222 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 INTS7Q9NVH2 962 aaKnown RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 DISC1C4P0D8 188 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 MATN3O15232 486 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 CPN2P22792 545 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 PROX2Q3B8N5 592 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 SLC51AQ86UW1 340 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 TMEM192Q8IY95 271 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 ZNF615Q8N8J6 731 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 ZNF384Q8TF68 577 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 TSNAXQ99598 290 aaKnown RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 SLC35A5Q9BS91 424 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 PCDHGB2Q9Y5G2 931 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 PCDHGA8Q9Y5G5 932 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 A0A1W2PPL8 197 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 TRBC2A0A5B9 178 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 HOXC6P09630 235 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 SSX2Q16385 188 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 PFDN5Q99471 154 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 DCAF13Q9NV06 445 aaKnown RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 GMPR2Q9P2T1 348 aaKnown RBP7.66□□□□□ -1.18
SMG1-202ENST00000446231 CKAP5Q14008 2032 aa7.66□□□□□ -1.18
SMG1-202ENST00000446231 A0A096LPI6 279 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 DNTTP04053 509 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 C21orf33P30042 268 aaPredicted RBP7.65□□□□□ -1.18
SMG1-202ENST00000446231 ATXN1P54253 815 aaKnown RBP7.65□□□□□ -1.18
SMG1-202ENST00000446231 ZSWIM9Q86XI8 627 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 LYSMD2Q8IV50 215 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 MOSPD2Q8NHP6 518 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 ZNF778Q96MU6 729 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 SLC7A5P2Q9GIP4 190 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 ARL6Q9H0F7 186 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 CHD2O14647 1828 aaKnown RBP7.65□□□□□ -1.18
SMG1-202ENST00000446231 TMX2-CTNND1H3BSU7 103 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 J3KR12 359 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 ZNF780AO75290 641 aaPredicted RBP7.65□□□□□ -1.18
SMG1-202ENST00000446231 CD2P06729 351 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 AQP6Q13520 282 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 SYT6Q5T7P8 510 aaPredicted RBP7.65□□□□□ -1.18
SMG1-202ENST00000446231 C22orf42Q6IC83 251 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 RBFAQ8N0V3 343 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 FAM46DQ8NEK8 389 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 TTC3P53804 2025 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 LCHNA4D1U4 455 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 JRKO75564 520 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 VMACQ2NL98 169 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 ZNF614Q8N883 585 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 MRIQ9BWK5 157 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 FAIM2Q9BWQ8 316 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 ZNF451Q9Y4E5 1061 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 RAI2Q9Y5P3 530 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 CLDN5O00501 218 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 B4GALT5O43286 388 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 DIRAS1O95057 198 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 PFKPQ01813 784 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 GJD3Q8N144 294 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 SLC30A3Q99726 388 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 SLC39A8Q9C0K1 460 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 CDT1Q9H211 546 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 SPATA31D1Q6ZQQ2 1576 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 A8MUA0 341 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 PVALBP20472 110 aaPredicted RBP7.65□□□□□ -1.18
SMG1-202ENST00000446231 GGT2P36268 569 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 BACE1P56817 501 aa7.65□□□□□ -1.18
SMG1-202ENST00000446231 ZNF678Q5SXM1 525 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms