RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 RAPSNQ13702 412 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 ATP1A4Q13733 1029 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 GRM7Q14831 915 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 KBTBD12Q3ZCT8 623 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 OXLD1Q5BKU9 147 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 SLC26A11Q86WA9 606 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 DENND6AQ8IWF6 608 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 CLEC1AQ8NC01 280 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 ADAMTS17Q8TE56 1095 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 ZUFSPQ96AP4 578 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 IP6K3Q96PC2 410 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 SELENOSQ9BQE4 189 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 ROPN1BQ9BZX4 212 aaPredicted RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 ROPN1Q9HAT0 212 aaPredicted RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 MOCS1Q9NZB8 636 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 PCDHGA9Q9Y5G4 932 aaKnown RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 SPTBN1Q01082 2364 aaKnown RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 USP9XQ93008 2570 aaPredicted RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 A0A1B0GX78 115 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 FAM159BA6NKW6 160 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 H3BMH7 237 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 KLF7O75840 302 aaPredicted RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 INMTO95050 263 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 FKBP9O95302 570 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 SYF2O95926 243 aaKnown RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 PDGFAP04085 211 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 EIF2S1P05198 315 aaKnown RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 PSMB5P28074 263 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 MSH2P43246 934 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 GABRA4P48169 554 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 PIN1Q13526 163 aaPredicted RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 SSPNQ14714 243 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 KRT71Q3SY84 523 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 LGSNQ5TDP6 509 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 ZNF385CQ66K41 422 aaPredicted RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 KIAA0408Q6ZU52 694 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 PPM1NQ8N819 430 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 TTC29Q8NA56 475 aaPredicted RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 OR2Y1Q8NGV0 311 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 ALKBH8Q96BT7 664 aaKnown RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 PTERQ96BW5 349 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 FER1L6-AS2Q96M78 137 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 ZIM3Q96PE6 472 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 STMN4Q9H169 189 aaPredicted RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 EPB41L4BQ9H329 900 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 FBXO6Q9NRD1 293 aaPredicted RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 ABCF3Q9NUQ8 709 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 GPR83Q9NYM4 423 aa8.39□□□□□ -1.07
USP6NL-203ENST00000443016 PSMC3IPQ9P2W1 217 aaPredicted RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 SNRNP200O75643 2136 aaKnown RBP8.39□□□□□ -1.07
USP6NL-203ENST00000443016 DOPEY2Q9Y3R5 2298 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 A0A0J9YVX5 310 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 TARM1B6A8C7 271 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 POC1B-GALNT4F8VUJ3 575 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 CDH16O75309 829 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 MATN4O95460 622 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 MYZAPP0CAP1 466 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 ERVK-10P10266 1014 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 PIM1P11309 404 aaPredicted RBP8.38□□□□□ -1.07
USP6NL-203ENST00000443016 ATP5DP30049 168 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 CMPK1P30085 196 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 SERPINB9P50453 376 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 VSX2P58304 361 aaPredicted RBP8.38□□□□□ -1.07
USP6NL-203ENST00000443016 CYP2A13Q16696 494 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 FAM214AQ32MH5 1076 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 TM4SF20Q53R12 229 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 HSP90AA5PQ58FG0 334 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 ACSBG2Q5FVE4 666 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 TRMT10BQ6PF06 316 aaKnown RBP8.38□□□□□ -1.07
USP6NL-203ENST00000443016 SUSD1Q6UWL2 747 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 MRGPREQ86SM8 312 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 FDCSPQ8NFU4 85 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 OR2L3Q8NG85 312 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 OR9A1PQ8NGU1 263 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 PAFAH2Q99487 392 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 CPNE1Q99829 537 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 IARS2Q9NSE4 1012 aaKnown RBP8.38□□□□□ -1.07
USP6NL-203ENST00000443016 CUTCQ9NTM9 273 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 SPATA7Q9P0W8 599 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 GALPQ9UBC7 116 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 PCDHGA11Q9Y5H2 935 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 A0A1W2PRQ8 180 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 SRPX2O60687 465 aaPredicted RBP8.38□□□□□ -1.07
USP6NL-203ENST00000443016 KRT38O76015 456 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 F7P08709 466 aaPredicted RBP8.38□□□□□ -1.07
USP6NL-203ENST00000443016 CNTFP26441 200 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 RPA3P35244 121 aaPredicted RBP8.38□□□□□ -1.07
USP6NL-203ENST00000443016 GP5P40197 560 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 SLC1A2P43004 574 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 CLK1P49759 484 aaKnown RBP8.38□□□□□ -1.07
USP6NL-203ENST00000443016 FOXL2P58012 376 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 NAA25Q14CX7 972 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 HSP90B2PQ58FF3 399 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 WASHC2DQ5SRD0 308 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 CEP85LQ5SZL2 805 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 THEMIS2Q5TEJ8 643 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 FCRL6Q6DN72 434 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 CFAP161Q6P656 301 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 CNTN4Q8IWV2 1026 aa8.38□□□□□ -1.07
USP6NL-203ENST00000443016 METTL27Q8N6F8 245 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms