RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PRTGQ2VWP7 1150 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 WASHC2DQ5SRD0 308 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 LCN10Q6JVE6 187 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 LRRC70Q7Z2Q7 622 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 VN1R4Q7Z5H5 301 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 TMPRSS11BQ86T26 416 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 LCA5Q86VQ0 697 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 SRRM1Q8IYB3 904 aaKnown RBP15.32■□□□□ 0.04
USP39-205ENST00000442708 CNPY4Q8N129 248 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 PTGR2Q8N8N7 351 aaPredicted RBP15.32■□□□□ 0.04
USP39-205ENST00000442708 SNX31Q8N9S9 440 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 NKD1Q969G9 470 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 MACROD1Q9BQ69 325 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 PELI2Q9HAT8 420 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 DCDC2Q9UHG0 476 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 ZMIZ1Q9ULJ6 1067 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 PCDHB3Q9Y5E6 796 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 KCNE2Q9Y6J6 123 aa15.32■□□□□ 0.04
USP39-205ENST00000442708 URB1O60287 2271 aaKnown RBP15.32■□□□□ 0.04
USP39-205ENST00000442708 CELSR3Q9NYQ7 3312 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 FITM1A5D6W6 292 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 A8MT66 165 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 K7EPI3 171 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 E2F3O00716 465 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 ZSCAN9O15535 394 aaPredicted RBP15.31■□□□□ 0.04
USP39-205ENST00000442708 DLX3O60479 287 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 RAD1O60671 282 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 SRPX2O60687 465 aaPredicted RBP15.31■□□□□ 0.04
USP39-205ENST00000442708 PROCP04070 461 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 EIF2S1P05198 315 aaKnown RBP15.31■□□□□ 0.04
USP39-205ENST00000442708 C1GALT1C1LP0DN25 315 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 CD22P20273 847 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 EEF1DP29692 281 aaKnown RBP15.31■□□□□ 0.04
USP39-205ENST00000442708 RORAP35398 523 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 REEP5Q00765 189 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 PCBP2Q15366 365 aaKnown RBP eCLIP15.31■□□□□ 0.04
USP39-205ENST00000442708 HKDC1Q2TB90 917 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 CEP85LQ5SZL2 805 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 C6orf15Q6UXA7 325 aaPredicted RBP15.31■□□□□ 0.04
USP39-205ENST00000442708 LRIG3Q6UXM1 1119 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 RPS27LQ71UM5 84 aaKnown RBP15.31■□□□□ 0.04
USP39-205ENST00000442708 GPR135Q8IZ08 494 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 ARHGEF39Q8N4T4 335 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 TEX9Q8N6V9 391 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 BANPQ8N9N5 519 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 ZNF248Q8NDW4 579 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 MOCOSQ96EN8 888 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 NSUN5Q96P11 429 aaKnown RBP15.31■□□□□ 0.04
USP39-205ENST00000442708 DCBLD2Q96PD2 775 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 ACTR5Q9H9F9 607 aaPredicted RBP15.31■□□□□ 0.04
USP39-205ENST00000442708 ACSS2Q9NR19 701 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 GEMIN8Q9NWZ8 242 aaKnown RBP15.31■□□□□ 0.04
USP39-205ENST00000442708 GPRC5BQ9NZH0 403 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 OPTCQ9UBM4 332 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 DHCR7Q9UBM7 475 aaKnown RBP15.31■□□□□ 0.04
USP39-205ENST00000442708 PCDHGA4Q9Y5G9 962 aa15.31■□□□□ 0.04
USP39-205ENST00000442708 DSPP15924 2871 aaKnown RBP15.3■□□□□ 0.04
USP39-205ENST00000442708 KCNE1BA0A087WTH5 132 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 LOC101059948A0A1B0GTJ6 334 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 TRBC2A0A5B9 178 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 G3V2L1 256 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 PLIN3O60664 434 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 CPNE3O75131 537 aaKnown RBP15.3■□□□□ 0.04
USP39-205ENST00000442708 SMIM24O75264 130 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 GLRA3O75311 464 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 H2AFXP16104 143 aaPredicted RBP15.3■□□□□ 0.04
USP39-205ENST00000442708 GNAZP19086 355 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 ITGAXP20702 1163 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 ITPKBP27987 946 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 CRHR1P34998 444 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 RPS15AP62244 130 aaKnown RBP15.3■□□□□ 0.04
USP39-205ENST00000442708 DOC2AQ14183 400 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 TNFAIP8L3Q5GJ75 292 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 ZNF385CQ66K41 422 aaPredicted RBP15.3■□□□□ 0.04
USP39-205ENST00000442708 ATG9BQ674R7 924 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 TLDC1Q6P9B6 456 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 FAM199XQ6PEV8 388 aaPredicted RBP15.3■□□□□ 0.04
USP39-205ENST00000442708 GOLGA7Q7Z5G4 137 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 VASH2Q86V25 355 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 SPACA3Q8IXA5 215 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 CACNA2D3Q8IZS8 1091 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 NLGN4XQ8N0W4 816 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 CSNK1A1LQ8N752 337 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 ANKRD53Q8N9V6 530 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 MFSD9Q8NBP5 474 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 NLGN4YQ8NFZ3 816 aaPredicted RBP15.3■□□□□ 0.04
USP39-205ENST00000442708 KCNE4Q8WWG9 221 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 TM4SF19Q96DZ7 209 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 C10orf90Q96M02 699 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 SARGQ9BW04 601 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 IRAK4Q9NWZ3 460 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 MKS1Q9NXB0 559 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 PCTPQ9UKL6 214 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 SSUH2Q9Y2M2 353 aa15.3■□□□□ 0.04
USP39-205ENST00000442708 MRPS2Q9Y399 296 aaKnown RBP15.3■□□□□ 0.04
USP39-205ENST00000442708 SEC16AO15027 2179 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 CCDC88CQ9P219 2028 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 SRRM3A6NNA2 597 aaPredicted RBP15.29■□□□□ 0.04
USP39-205ENST00000442708 STX16-NPEPL1H3BU86 382 aa15.29■□□□□ 0.04
USP39-205ENST00000442708 MEN1O00255 615 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms