RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 VPS28Q9UK41 221 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 FBXW11Q9UKB1 542 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 PLLPQ9Y342 182 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZNFX1Q9P2E3 1918 aaKnown RBP3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZNF236Q9UL36 1845 aa3.4□□□□□ -1.87
HMGB3P11-201ENST00000440127 ANK1P16157 1881 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 A0A0U1RQF3 1178 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARHGEF37A1IGU5 675 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 MAGEB16A2A368 324 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 EME2A4GXA9 379 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 CASTOR2A6NHX0 329 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 MBD3L5A6NJ08 208 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 ERI2A8K979 691 aaKnown RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 HHLA1C9JL84 531 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM72CH0Y354 149 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 I3L4J1 428 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 M0QZQ0 153 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 AP3B1O00203 1094 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 RNF103O00237 685 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 KLF11O14901 512 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 BIRC5O15392 142 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 SEPT4O43236 478 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 MFSD11O43934 449 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 UGT1A9O60656 530 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 CABYRO75952 493 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 ATP6V1G2O95670 118 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 PGK1P00558 417 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 CLEC3BP05452 202 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 FYNP06241 537 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 ENO1P06733 434 aaKnown RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 CSH1P0DML2 217 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 CSH2P0DML3 217 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 LAMP2P13473 410 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 ALOX12P18054 663 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 TYMPP19971 482 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 BGNP21810 368 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 YY1P25490 414 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 PTPN3P26045 913 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 PSMB4P28070 264 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 NDUFS1P28331 727 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 CD52P31358 61 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 SERPINB6P35237 376 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 KRT20P35900 424 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 PGM1P36871 562 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 THPOP40225 353 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 GARSP41250 739 aaKnown RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 GRIA1P42261 906 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 BRCC3P46736 316 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 NPY2RP49146 381 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 CXCR3P49682 368 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 LINC00205P59089 165 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARF3P61204 181 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 KCNJ2P63252 427 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 PITX1P78337 314 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 COG7P83436 770 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 ARF1P84077 181 aaKnown RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 CDK18Q07002 472 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 PPIDQ08752 370 aaKnown RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 GRIK3Q13003 919 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 SEMA3BQ13214 749 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 BFSP2Q13515 415 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 TBCEQ15813 527 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 UPP1Q16831 310 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 PRTGQ2VWP7 1150 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 TBRG1Q3YBR2 411 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 LEXMQ3ZCV2 418 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 TEX44Q53QW1 395 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 TAF1BQ53T94 588 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 SPANXN3Q5MJ09 141 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM182AQ5T1J6 154 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 STXBP5Q5T5C0 1151 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 GRTP1Q5TC63 336 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM72AQ5TYM5 149 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 LIPMQ5VYY2 423 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 BSPRYQ5W0U4 402 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 PM20D1Q6GTS8 502 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM72DQ6L9T8 149 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 CASC4Q6P4E1 433 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM171BQ6P995 826 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZNF449Q6P9G9 518 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 INO80CQ6PI98 192 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 KYAT3Q6YP21 454 aaKnown RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 MARK2Q7KZI7 788 aaKnown RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 ASRGL1Q7L266 308 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 NLRP9Q7RTR0 991 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 PXKQ7Z7A4 578 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 FAM72BQ86X60 149 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 NUDCD3Q8IVD9 361 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 NDUFAF2Q8N183 169 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 ZNF567Q8N184 647 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 GPATCH11Q8N954 259 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 STKLD1Q8NE28 680 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 KLHDC9Q8NEP7 349 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 NFKBIDQ8NI38 313 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 RAB3IL1Q8TBN0 382 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 ACMSDQ8TDX5 336 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 TRIB2Q92519 343 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 INPP5DQ92835 1189 aa3.39□□□□□ -1.87
HMGB3P11-201ENST00000440127 MYLPFQ96A32 169 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms