RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 MENTQ9BUN1 341 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 PCBD2Q9H0N5 130 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 SLC6A17Q9H1V8 727 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 SPNS1Q9H2V7 528 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 PIF1Q9H611 641 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 KAT8Q9H7Z6 458 aaKnown RBP11.35□□□□□ -0.59
SMAD3-202ENST00000439724 PELI2Q9HAT8 420 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 C8orf4Q9NR00 106 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 PLAGL1Q9UM63 463 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 INVSQ9Y283 1065 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 PIAS3Q9Y6X2 628 aa11.35□□□□□ -0.59
SMAD3-202ENST00000439724 CEP290O15078 2479 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 LAMA2P24043 3122 aaKnown RBP11.34□□□□□ -0.59
SMAD3-202ENST00000439724 PRR23AA6NEV1 266 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 A6NHS1 94 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 TXNDC9O14530 226 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 RFXANKO14593 260 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 FUCA1P04066 466 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 CEACAM5P06731 702 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 ANXA4P09525 319 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-202ENST00000439724 UBTFL6P0CB48 400 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-202ENST00000439724 ACP5P13686 325 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 HPCAL1P37235 193 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 CDKN2CP42773 168 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 CCT8P50990 548 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 CLCN2P51788 898 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 CLCNKAP51800 687 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 CTBSQ01459 385 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 PRKCQQ04759 706 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 ABHD18Q0P651 414 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 GRSF1Q12849 480 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMAD3-202ENST00000439724 PDK3Q15120 406 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 ATP6AP1Q15904 470 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 ANKRD46Q86W74 232 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 C17orf64Q86WR6 236 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 KRT78Q8N1N4 520 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 GALNT4Q8N4A0 578 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 LMNTD1Q8N9Z9 388 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 OR7A2PQ8NGA2 310 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 SMPDL3AQ92484 453 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 POP5Q969H6 163 aaKnown RBP11.34□□□□□ -0.59
SMAD3-202ENST00000439724 GFM2Q969S9 779 aaKnown RBP11.34□□□□□ -0.59
SMAD3-202ENST00000439724 SCARF2Q96GP6 870 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-202ENST00000439724 BTBD1Q9H0C5 482 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 WASH6PQ9NQA3 447 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 ADGRE2Q9UHX3 823 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 CD207Q9UJ71 328 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 TDRKHQ9Y2W6 561 aaKnown RBP11.34□□□□□ -0.59
SMAD3-202ENST00000439724 MTCH2Q9Y6C9 303 aa11.34□□□□□ -0.59
SMAD3-202ENST00000439724 EIF4E1BA6NMX2 242 aaKnown RBP11.33□□□□□ -0.6
SMAD3-202ENST00000439724 CACNB4O00305 520 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-202ENST00000439724 FPGTO14772 594 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 GSTA4O15217 222 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 PCDH7O60245 1069 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 B3GALT4O96024 378 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 HOXC4P09017 264 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-202ENST00000439724 KIAA1024LP59773 190 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 ZNF763Q0D2J5 394 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 LRRC74AQ0VAA2 488 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 SFSWAPQ12872 951 aaKnown RBP11.33□□□□□ -0.6
SMAD3-202ENST00000439724 PYCR3Q53H96 274 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 UGT2A3Q6UWM9 527 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 TMIGD1Q6UXZ0 262 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 ZBTB49Q6ZSB9 765 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 CHST15Q7LFX5 561 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-202ENST00000439724 GPR155Q7Z3F1 870 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 APLFQ8IW19 511 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-202ENST00000439724 METTL4Q8N3J2 472 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 DENND6BQ8NEG7 585 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.33□□□□□ -0.6
SMAD3-202ENST00000439724 COQ8BQ96D53 544 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 FAM120BQ96EK7 910 aaKnown RBP11.33□□□□□ -0.6
SMAD3-202ENST00000439724 SIPA1Q96FS4 1042 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 REXO5Q96IC2 774 aaKnown RBP11.33□□□□□ -0.6
SMAD3-202ENST00000439724 SLC29A1Q99808 456 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 CIB1Q99828 191 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 APOOQ9BUR5 198 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 C9orf16Q9BUW7 83 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 DUSP26Q9BV47 211 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 OSBPL11Q9BXB4 747 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 PITHD1Q9GZP4 211 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-202ENST00000439724 PDP2Q9P2J9 529 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 TAC3Q9UHF0 121 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 ATP6V1HQ9UI12 483 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 BTNL2Q9UIR0 455 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 NCKAP1Q9Y2A7 1128 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 GMEB1Q9Y692 573 aa11.33□□□□□ -0.6
SMAD3-202ENST00000439724 TBC1D3DA0A087WVF3 549 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 TBC1D3IA0A087WXS9 549 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 TBC1D3EA0A087X179 549 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 TBC1D3KA0A087X1G2 549 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 A0A1W2PPV9 198 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 C7orf72A4D263 438 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 TBC1D3FA6NER0 549 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-202ENST00000439724 GABRR3A8MPY1 467 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 TBC1D3LB9A6J9 549 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 CXCR6O00574 342 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 TPST1O60507 370 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 GSNP06396 782 aa11.32□□□□□ -0.6
SMAD3-202ENST00000439724 RETP07949 1114 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms