RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 FAM120BQ96EK7 910 aaKnown RBP8.31□□□□□ -1.08
HPS4-206ENST00000439453 ZFYVE19Q96K21 471 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 TTYH2Q9BSA4 534 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 CLPBQ9H078 707 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 C1orf109Q9NX04 203 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 TAS2R9Q9NYW1 312 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 PDP1Q9P0J1 537 aaPredicted RBP8.31□□□□□ -1.08
HPS4-206ENST00000439453 ABCG2Q9UNQ0 655 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 LYVE1Q9Y5Y7 322 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 A0A096LPI6 279 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 E9PAM4 449 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 PCDHGA12O60330 932 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 ADH1AP07327 375 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 ODC1P11926 461 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 ENDOUP21128 410 aaKnown RBP8.31□□□□□ -1.08
HPS4-206ENST00000439453 C21orf33P30042 268 aaPredicted RBP8.31□□□□□ -1.08
HPS4-206ENST00000439453 SPANXN4Q5MJ08 99 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 ATG9BQ674R7 924 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 NEK5Q6P3R8 708 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 NRARPQ7Z6K4 114 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 CCDC190Q86UF4 302 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 CALHM3Q86XJ0 350 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 GPSM1Q86YR5 675 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 SIX5Q8N196 739 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 SPATA17Q96L03 361 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 Q96MT0 163 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 IRF2BPLQ9H1B7 796 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 OR51E2Q9H255 320 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 TBC1D24Q9ULP9 559 aa8.31□□□□□ -1.08
HPS4-206ENST00000439453 A0A0U1RQS6 177 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 LOC285095A0A1B0GVY8 99 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 UGT2B15P54855 530 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 RPL38P63173 70 aaKnown RBP8.3□□□□□ -1.08
HPS4-206ENST00000439453 CSNK2BP67870 215 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 RPP38P78345 283 aaKnown RBP8.3□□□□□ -1.08
HPS4-206ENST00000439453 ELP6Q0PNE2 266 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 EIF4EBP2Q13542 120 aaPredicted RBP8.3□□□□□ -1.08
HPS4-206ENST00000439453 SMAD2Q15796 467 aaKnown RBP8.3□□□□□ -1.08
HPS4-206ENST00000439453 TBCEQ15813 527 aaPredicted RBP8.3□□□□□ -1.08
HPS4-206ENST00000439453 DDR2Q16832 855 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 TBRG1Q3YBR2 411 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 CEP78Q5JTW2 689 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 ZNF517Q6ZMY9 492 aaPredicted RBP8.3□□□□□ -1.08
HPS4-206ENST00000439453 C10orf111Q8N326 155 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 NKAPQ8N5F7 415 aaKnown RBP8.3□□□□□ -1.08
HPS4-206ENST00000439453 GRPEL2Q8TAA5 225 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 SMARCD1Q96GM5 515 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 NEDD4LQ96PU5 975 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 CCDC32Q9BV29 185 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 KRT84Q9NSB2 600 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 ERVK13-1Q9NX77 482 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 CD207Q9UJ71 328 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 MUSKO15146 869 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 ICMTO60725 284 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 ZNF682O95780 498 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 MOCS2O96007 188 aaPredicted RBP8.3□□□□□ -1.08
HPS4-206ENST00000439453 KRT6AP02538 564 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 KRT6BP04259 564 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 PIRTP0C851 137 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 DNAJA1P31689 397 aaKnown RBP8.3□□□□□ -1.08
HPS4-206ENST00000439453 GZMMP51124 257 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 SMAD4Q13485 552 aaKnown RBP8.3□□□□□ -1.08
HPS4-206ENST00000439453 ABRAXAS2Q15018 415 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 OVOS1Q6IE37 1185 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 VN1R5Q7Z5H4 357 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 RAB43Q86YS6 212 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 PLPP6Q8IY26 295 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 ENTHD1Q8IYW4 607 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 OR8H2Q8N162 312 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 TCAIMQ8N3R3 496 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 JPH3Q8WXH2 748 aaPredicted RBP8.3□□□□□ -1.08
HPS4-206ENST00000439453 POP5Q969H6 163 aaKnown RBP8.3□□□□□ -1.08
HPS4-206ENST00000439453 HMCESQ96FZ2 354 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 PITX2Q99697 317 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 DPY30Q9C005 99 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 ZFP14Q9HCL3 533 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 SLC6A13Q9NSD5 602 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 KIF17Q9P2E2 1029 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 LOC105371267A0A1B0GV96 52 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 MTMR11A4FU01 709 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 FAM25AB3EWG3 89 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 FAM25CB3EWG5 89 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 FAM25GB3EWG6 89 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 DIRAS1O95057 198 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 GLUD1P00367 558 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 PGRP06401 933 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 MYCLP1P12525 358 aaPredicted RBP8.3□□□□□ -1.08
HPS4-206ENST00000439453 FPR1P21462 350 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 CTXN3Q4LDR2 81 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 WDR45BQ5MNZ6 344 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 ZNF438Q7Z4V0 828 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 P3H2Q8IVL5 708 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 ANGPTL6Q8NI99 470 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 ARRDC2Q8TBH0 407 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 PEX13Q92968 403 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 TMCO6Q96DC7 493 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 RNF170Q96K19 258 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 PPP3R2Q96LZ3 170 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 OR2A14Q96R47 310 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 PHOX2BQ99453 314 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms