RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 SECISBP2LQ93073 1101 aaKnown RBP3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 HDAC11Q96DB2 347 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 MUS81Q96NY9 551 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 MTMR12Q9C0I1 747 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 TMX4Q9H1E5 349 aaPredicted RBP3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 TLE6Q9H808 572 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 Q9H8V8 135 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 BCCIPQ9P287 314 aaKnown RBP eCLIP3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 WDR35Q9P2L0 1181 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 TNNQ9UQP3 1299 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 WDR83OSQ9Y284 106 aa3.03□□□□□ -1.92
UPP2-IT1-201ENST00000439185 A0A1W2PPK0 400 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 EPHB6O15197 1021 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 FIBPO43427 364 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 SLCO2B1O94956 709 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CSN3P07498 182 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 HOXD4P09016 255 aaPredicted RBP3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 GP1BBP13224 206 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CYP11B2P19099 503 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CPT2P23786 658 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TSFMP43897 325 aaKnown RBP3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 NUCB1Q02818 461 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ACSM1Q08AH1 577 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 MTF1Q14872 753 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 RASA2Q15283 850 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 KRT39Q6A163 491 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 FAM166AQ6J272 317 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 KRT80Q6KB66 452 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 UGT3A1Q6NUS8 523 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 OR1L3Q8NH93 324 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ROBO4Q8WZ75 1007 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 FAM71F1Q96KD3 344 aaPredicted RBP3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CENPOQ9BU64 300 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 FAM49AQ9H0Q0 323 aaPredicted RBP3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 THAP2Q9H0W7 228 aa3.02□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CASTOR2A6NHX0 329 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 GPRIN2O60269 458 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ACSL3O95573 720 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 DNTTP04053 509 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 FYNP06241 537 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 OR52Z1P0C646 297 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 SLC2A2P11168 524 aaPredicted RBP3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 DARSP14868 501 aaKnown RBP3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 EPCAMP16422 314 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ACHEP22303 614 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 EEF1DP29692 281 aaKnown RBP3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 HLA-FP30511 346 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 VAMP7P51809 220 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 PPP5CP53041 499 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CLDN15P56746 228 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CSNK2BP67870 215 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 GUCY2DQ02846 1103 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 NPTX1Q15818 432 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TCP11X2Q5H9J9 407 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 RPUSD3Q6P087 351 aaKnown RBP3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 FRRS1Q6ZNA5 592 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 SLC25A42Q86VD7 318 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 OR8H2Q8N162 312 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 METTL4Q8N3J2 472 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 FGFRL1Q8N441 504 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 PI4KAP1Q8N8J0 262 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CCDC89Q8N998 374 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 GATAD1Q8WUU5 269 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 RFT1Q96AA3 541 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 PRRG4Q9BZD6 226 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ZMYND12Q9H0C1 365 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 HEXA-AS1Q9H8Q6 139 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TBC1D7Q9P0N9 293 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CTSZQ9UBR2 303 aa3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 C19orf25Q9UFG5 118 aaPredicted RBP3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ZNF107Q9UII5 783 aaPredicted RBP3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 MYH14Q7Z406 1995 aaKnown RBP3.01□□□□□ -1.93
UPP2-IT1-201ENST00000439185 LOC105371242A0A075B767 164 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 URADA6NGE7 173 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 A8MXE2 369 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 PLOD3O60568 738 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TBX10O75333 385 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 GGPS1O95749 300 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 KRT20P35900 424 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CAPGP40121 348 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 EIPR1Q53HC9 387 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CES4AQ5XG92 561 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 OR4A47Q6IF82 309 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 ZNF841Q6ZN19 808 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 Q6ZVH6 145 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CEACAM19Q7Z692 300 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 TLK2Q86UE8 772 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CATSPERDQ86XM0 798 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 MFN1Q8IWA4 741 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 RYBPQ8N488 228 aaPredicted RBP3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 RASGEF1AQ8N9B8 481 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 OR10Q1Q8NGQ4 319 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 APOBEC4Q8WW27 367 aaKnown RBP3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 SPSB1Q96BD6 273 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 RMDN1Q96DB5 314 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 OTUB1Q96FW1 271 aaPredicted RBP3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 C4orf45Q96LM5 186 aa3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 C1orf147Q96MC9 270 aaPredicted RBP3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 NKX3-1Q99801 234 aaPredicted RBP3□□□□□ -1.93
UPP2-IT1-201ENST00000439185 CCDC3Q9BQI4 270 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms