RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SPATA7Q9P0W8 599 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 MATN2O00339 956 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 PRKAR1AP10644 381 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 MYCLP1P12525 358 aaPredicted RBP11.74□□□□□ -0.53
NEK1-201ENST00000439128 MRPS21P82921 87 aaKnown RBP11.74□□□□□ -0.53
NEK1-201ENST00000439128 OGDHQ02218 1023 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 SLC34A1Q06495 639 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 TREML1Q86YW5 311 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 CHST4Q8NCG5 386 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 OR4K14Q8NGD5 310 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 ASB15Q8WXK1 588 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 FATE1Q969F0 183 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 SLC2A13Q96QE2 648 aa11.74□□□□□ -0.53
NEK1-201ENST00000439128 CPNE3O75131 537 aaKnown RBP11.73□□□□□ -0.53
NEK1-201ENST00000439128 CCNB2O95067 398 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 NUDT17P0C025 328 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 DSTNP60981 165 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 TMEM240Q5SV17 173 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 TMEM198Q66K66 360 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 GOLGA7Q7Z5G4 137 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 SFRP1Q8N474 314 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 PMM1Q92871 262 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 COL21A1Q96P44 957 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 DPH7Q9BTV6 452 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 CCDC28BQ9BUN5 200 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 FAM192AQ9GZU8 254 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 WBP1LQ9NX94 342 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 hCG_2039718K7EN88 272 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 PSMD11O00231 422 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 SEC14L5O43304 696 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 GPR37L1O60883 481 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 ACRV1P26436 265 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 CXorf57Q6NSI4 855 aaKnown RBP11.73□□□□□ -0.53
NEK1-201ENST00000439128 ADGRD1Q6QNK2 874 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 NLGN4YQ8NFZ3 816 aaPredicted RBP11.73□□□□□ -0.53
NEK1-201ENST00000439128 OR5L2Q8NGL0 311 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 SHKBP1Q8TBC3 707 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 NPIPA2E9PIF3 369 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 NPIPA3F8WFD2 350 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 MED26O95402 600 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 SRCP12931 536 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 NR2C1P13056 603 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 MSX2P35548 267 aaPredicted RBP11.73□□□□□ -0.53
NEK1-201ENST00000439128 PITX1P78337 314 aaPredicted RBP11.73□□□□□ -0.53
NEK1-201ENST00000439128 SLC25A11Q02978 314 aaKnown RBP11.73□□□□□ -0.53
NEK1-201ENST00000439128 TTMPQ5BVD1 217 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 REP15Q6BDI9 236 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 HDDC2Q7Z4H3 204 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 NRROSQ86YC3 692 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 NATD1Q8N6N6 113 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 OR52E4Q8NGH9 312 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 CEP295NLQ96MC4 621 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 PSKH2Q96QS6 385 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 NUAK2Q9H093 628 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 COMMD4Q9H0A8 199 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 RETREG1Q9H6L5 497 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 PTRH2Q9Y3E5 179 aaKnown RBP11.73□□□□□ -0.53
NEK1-201ENST00000439128 PRAMEF12O95522 483 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 GJA4P35212 333 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 STC1P52823 247 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 PLP2Q04941 152 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 NSDHLQ15738 373 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 IFI44LQ53G44 452 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 FBXW8Q8N3Y1 598 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 ZSCAN4Q8NAM6 433 aaPredicted RBP11.73□□□□□ -0.53
NEK1-201ENST00000439128 PROKR2Q8NFJ6 384 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 KCNJ9Q92806 393 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 TMCO6Q96DC7 493 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 GPATCH1Q9BRR8 931 aaKnown RBP11.73□□□□□ -0.53
NEK1-201ENST00000439128 PHF7Q9BWX1 381 aaPredicted RBP11.73□□□□□ -0.53
NEK1-201ENST00000439128 XYLT2Q9H1B5 865 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 THUMPD1Q9NXG2 353 aaKnown RBP11.73□□□□□ -0.53
NEK1-201ENST00000439128 OR1I1O60431 355 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 NPHS1O60500 1241 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 TRIM3O75382 744 aaPredicted RBP11.73□□□□□ -0.53
NEK1-201ENST00000439128 PRPS1L1P21108 318 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 HRH2P25021 359 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 LIPEQ05469 1076 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 LRP8Q14114 963 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 HERC3Q15034 1050 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 ZNF781Q8N8C0 355 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 ANKFN1Q8N957 763 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 PEX11GQ96HA9 241 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 C11orf16Q9NQ32 467 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 TAS2R9Q9NYW1 312 aa11.73□□□□□ -0.53
NEK1-201ENST00000439128 GPC6Q9Y625 555 aaPredicted RBP11.73□□□□□ -0.53
NEK1-201ENST00000439128 MYH2Q9UKX2 1941 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 A0A075B6Q4 140 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 A8MVJ9 347 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 TSC22D2O75157 780 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 ZNF20P17024 532 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 MNDAP41218 407 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 CBX5P45973 191 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 RBPJQ06330 500 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 FCHO2Q0JRZ9 810 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 GANABQ14697 944 aaKnown RBP11.72□□□□□ -0.53
NEK1-201ENST00000439128 NNATQ16517 81 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 TRIM16LQ309B1 348 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 TMEM225Q6GV28 225 aa11.72□□□□□ -0.53
NEK1-201ENST00000439128 MFSD6LQ8IWD5 586 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms