RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 INPP5KQ9BT40 448 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 C9orf16Q9BUW7 83 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 REXO4Q9GZR2 422 aaKnown RBP24.77■■□□□ 1.56
CPNE1-216ENST00000437340 MKRN2Q9H000 416 aaKnown RBP24.77■■□□□ 1.56
CPNE1-216ENST00000437340 SLC6A13Q9NSD5 602 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 SH2B3Q9UQQ2 575 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 DNTTP04053 509 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 MYCLP1P12525 358 aaPredicted RBP24.77■■□□□ 1.56
CPNE1-216ENST00000437340 COX7A2P14406 83 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 SOX11P35716 441 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 NRF1Q16656 503 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 DUOXA1Q1HG43 343 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 TMEM259Q4ZIN3 620 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 OR52E8Q6IFG1 317 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 ADNP2Q6IQ32 1131 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 CAMKMTQ7Z624 323 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 MICU2Q8IYU8 434 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 GFM2Q969S9 779 aaKnown RBP24.77■■□□□ 1.56
CPNE1-216ENST00000437340 C1QTNF7Q9BXJ2 289 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 RMI1Q9H9A7 625 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 C7orf72A4D263 438 aa24.76■■□□□ 1.55
CPNE1-216ENST00000437340 TPST1O60507 370 aa24.76■■□□□ 1.55
CPNE1-216ENST00000437340 ANXA4P09525 319 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-216ENST00000437340 ZCCHC18P0CG32 403 aa24.76■■□□□ 1.55
CPNE1-216ENST00000437340 CKMT2P17540 419 aa24.76■■□□□ 1.55
CPNE1-216ENST00000437340 TIA1P31483 386 aaKnown RBP eCLIP24.76■■□□□ 1.551e-6■■■□□ 17.9
CPNE1-216ENST00000437340 PIK3CBP42338 1070 aa24.76■■□□□ 1.55
CPNE1-216ENST00000437340 THEMIS2Q5TEJ8 643 aa24.76■■□□□ 1.55
CPNE1-216ENST00000437340 PHC3Q8NDX5 983 aa24.76■■□□□ 1.55
CPNE1-216ENST00000437340 GANCQ8TET4 914 aa24.76■■□□□ 1.55
CPNE1-216ENST00000437340 DMRT3Q9NQL9 472 aa24.76■■□□□ 1.55
CPNE1-216ENST00000437340 SPATA7Q9P0W8 599 aa24.76■■□□□ 1.55
CPNE1-216ENST00000437340 SCML1Q9UN30 329 aa24.76■■□□□ 1.55
CPNE1-216ENST00000437340 OR1A2Q9Y585 309 aa24.76■■□□□ 1.55
CPNE1-216ENST00000437340 MYO10Q9HD67 2058 aa24.76■■□□□ 1.55
CPNE1-216ENST00000437340 SCAMP2O15127 329 aaKnown RBP24.75■■□□□ 1.55
CPNE1-216ENST00000437340 SCN2BO60939 215 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 RAP2AP10114 183 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 CTHP32929 405 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 GZMMP51124 257 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 WNT3P56703 355 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 PHEXP78562 749 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 ABHD18Q0P651 414 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 TMTC4Q5T4D3 741 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 C6orf52Q5T4I8 152 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 GCNT7Q6ZNI0 430 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 ANKRD46Q86W74 232 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 MFSD2AQ8NA29 543 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 OR7A2PQ8NGA2 310 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 CXorf40BQ96DE9 158 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 FAM120BQ96EK7 910 aaKnown RBP24.75■■□□□ 1.55
CPNE1-216ENST00000437340 CHID1Q9BWS9 393 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 UGT2B28Q9BY64 529 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 SLC17A9Q9BYT1 436 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 YY1AP1Q9H869 796 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 TM7SF3Q9NS93 570 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 SLC35G4P0C7Q5 338 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 CDKN2CP42773 168 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 CYP2A13Q16696 494 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 FAM98BQ52LJ0 330 aaKnown RBP24.75■■□□□ 1.55
CPNE1-216ENST00000437340 CAPRIN2Q6IMN6 1127 aaKnown RBP24.75■■□□□ 1.55
CPNE1-216ENST00000437340 SPRED1Q7Z699 444 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 IL17RCQ8NAC3 791 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 OR14C36Q8NHC7 312 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 FIG4Q92562 907 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 IL17FQ96PD4 163 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 SEPHS2Q99611 448 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 PRPF18Q99633 342 aaKnown RBP24.75■■□□□ 1.55
CPNE1-216ENST00000437340 TIMM29Q9BSF4 260 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 TRIT1Q9H3H1 467 aaKnown RBP24.75■■□□□ 1.55
CPNE1-216ENST00000437340 KCNK12Q9HB15 430 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 LIMD1Q9UGP4 676 aa24.75■■□□□ 1.55
CPNE1-216ENST00000437340 A0A1W2PQU0 124 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 CXCR6O00574 342 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 SOCS2O14508 198 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 KCNJ13O60928 360 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 LDLRP01130 860 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 RETP07949 1114 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 C7P10643 843 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 HOXB6P17509 224 aaKnown RBP24.74■■□□□ 1.55
CPNE1-216ENST00000437340 HPCAL1P37235 193 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 PHACTR4Q8IZ21 702 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 ST13P4Q8IZP2 240 aaPredicted RBP24.74■■□□□ 1.55
CPNE1-216ENST00000437340 KRT78Q8N1N4 520 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 HLA-CQ95604 372 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 REXO5Q96IC2 774 aaKnown RBP24.74■■□□□ 1.55
CPNE1-216ENST00000437340 RNF145Q96MT1 663 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 PHF7Q9BWX1 381 aaPredicted RBP24.74■■□□□ 1.55
CPNE1-216ENST00000437340 PCBD2Q9H0N5 130 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 PREBQ9HCU5 417 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 PRM3Q9NNZ6 103 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 UBAP1Q9NZ09 502 aa24.74■■□□□ 1.55
CPNE1-216ENST00000437340 TDRKHQ9Y2W6 561 aaKnown RBP24.74■■□□□ 1.55
CPNE1-216ENST00000437340 CROCCQ5TZA2 2017 aa24.73■■□□□ 1.55
CPNE1-216ENST00000437340 FAM149AA5PLN7 773 aa24.73■■□□□ 1.55
CPNE1-216ENST00000437340 SAC3D1A6NKF1 404 aa24.73■■□□□ 1.55
CPNE1-216ENST00000437340 RNGTTO60942 597 aaKnown RBP24.73■■□□□ 1.55
CPNE1-216ENST00000437340 TXNL4AP83876 142 aaKnown RBP24.73■■□□□ 1.55
CPNE1-216ENST00000437340 LRRC74AQ0VAA2 488 aa24.73■■□□□ 1.55
CPNE1-216ENST00000437340 LPCAT2Q7L5N7 544 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms