RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 GPRIN3Q6ZVF9 776 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 RNF44Q7L0R7 432 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 TMPRSS7Q7RTY8 843 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 B3GNT8Q7Z7M8 397 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 FAM129CQ86XR2 697 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 FAM20CQ8IXL6 584 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 L3MBTL4Q8NA19 623 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 RCBTB1Q8NDN9 531 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 FAM76AQ8TAV0 307 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 PPM1MQ96MI6 270 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 NSUN5Q96P11 429 aaKnown RBP12.93□□□□□ -0.34
EXT1-203ENST00000437196 NLNQ9BYT8 704 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 KLHL25Q9H0H3 589 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 ZBTB26Q9HCK0 441 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 TRPS1Q9UHF7 1281 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 SERTAD3Q9UJW9 196 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 PLCL2Q9UPR0 1127 aa12.93□□□□□ -0.34
EXT1-203ENST00000437196 B4E171 279 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 OR7A17O14581 309 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 CASC3O15234 703 aaKnown RBP12.92□□□□□ -0.34
EXT1-203ENST00000437196 CRCPO75575 148 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 ESRRBO95718 433 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 EPORP19235 508 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 AHRP35869 848 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 TSPAN7P41732 249 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 RAB15P59190 212 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 REEP5Q00765 189 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 STX3Q13277 289 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 SLBPQ14493 270 aaKnown RBP eCLIP12.92□□□□□ -0.34
EXT1-203ENST00000437196 IL11RAQ14626 422 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 TTC19Q6DKK2 380 aaPredicted RBP12.92□□□□□ -0.34
EXT1-203ENST00000437196 MED27Q6P2C8 311 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 RAB11FIP2Q7L804 512 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 GPR135Q8IZ08 494 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 DNAJC22Q8N4W6 341 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 TRPV3Q8NET8 790 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 WDR36Q8NI36 951 aaKnown RBP12.92□□□□□ -0.34
EXT1-203ENST00000437196 MDM1Q8TC05 714 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 MANSC1Q9H8J5 431 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 MID1IP1Q9NPA3 183 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 FGF21Q9NSA1 209 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 GEMIN8Q9NWZ8 242 aaKnown RBP12.92□□□□□ -0.34
EXT1-203ENST00000437196 SNX6Q9UNH7 406 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 SH2B3Q9UQQ2 575 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 KLHL20Q9Y2M5 609 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 COL27A1Q8IZC6 1860 aaPredicted RBP12.92□□□□□ -0.34
EXT1-203ENST00000437196 SPEGQ15772 3267 aa12.92□□□□□ -0.34
EXT1-203ENST00000437196 ANKDD1BA6NHY2 528 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 H0YIV9 168 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 KLF11O14901 512 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 HAT1O14929 419 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 OR1F1O43749 312 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 CHEK2O96017 543 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 JMJD7P0C870 316 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 HGFP14210 728 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 BGNP21810 368 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 VARSP26640 1264 aaKnown RBP12.91□□□□□ -0.34
EXT1-203ENST00000437196 YBX1P67809 324 aaKnown RBP12.91□□□□□ -0.34
EXT1-203ENST00000437196 ZNF33BQ06732 778 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 TRAF3Q13114 568 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 TARDBPQ13148 414 aaKnown RBP eCLIP12.91□□□□□ -0.34
EXT1-203ENST00000437196 TUBB3Q13509 450 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 C16orf72Q14CZ0 275 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 RBBP5Q15291 538 aaKnown RBP12.91□□□□□ -0.34
EXT1-203ENST00000437196 ZIC1Q15915 447 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 MANEAQ5SRI9 462 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 TMEM164Q5U3C3 297 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 MCATQ8IVS2 390 aaKnown RBP12.91□□□□□ -0.34
EXT1-203ENST00000437196 AFAP1L2Q8N4X5 818 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 MFSD9Q8NBP5 474 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 OR4F6Q8NGB9 312 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 OR52B6Q8NGF0 335 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 OR6Y1Q8NGX8 325 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 LRRC8CQ8TDW0 803 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 ZPBPQ9BS86 351 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 SLC29A3Q9BZD2 475 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 PRM3Q9NNZ6 103 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 FBXO8Q9NRD0 319 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 THAP1Q9NVV9 213 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 ZFP69BQ9UJL9 534 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 PILRAQ9UKJ1 303 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 RARRES3Q9UL19 164 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 TSC22D4Q9Y3Q8 395 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 LOXL2Q9Y4K0 774 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 PTPRBP23467 1997 aa12.91□□□□□ -0.34
EXT1-203ENST00000437196 A0A0J9YVX5 310 aa12.9□□□□□ -0.34
EXT1-203ENST00000437196 URADA6NGE7 173 aa12.9□□□□□ -0.34
EXT1-203ENST00000437196 EFCAB7A8K855 629 aa12.9□□□□□ -0.34
EXT1-203ENST00000437196 PLD2O14939 933 aa12.9□□□□□ -0.34
EXT1-203ENST00000437196 POLR1CO15160 346 aaPredicted RBP12.9□□□□□ -0.34
EXT1-203ENST00000437196 CTSVO60911 334 aa12.9□□□□□ -0.34
EXT1-203ENST00000437196 HSPA4LO95757 839 aa12.9□□□□□ -0.34
EXT1-203ENST00000437196 KRT6AP02538 564 aa12.9□□□□□ -0.34
EXT1-203ENST00000437196 KRT6BP04259 564 aa12.9□□□□□ -0.34
EXT1-203ENST00000437196 SLC35G6P0C7Q6 338 aa12.9□□□□□ -0.34
EXT1-203ENST00000437196 HMOX2P30519 316 aa12.9□□□□□ -0.34
EXT1-203ENST00000437196 SCTRP47872 440 aa12.9□□□□□ -0.34
EXT1-203ENST00000437196 SLC1A6P48664 564 aa12.9□□□□□ -0.34
EXT1-203ENST00000437196 KRT6CP48668 564 aa12.9□□□□□ -0.34
EXT1-203ENST00000437196 ABCE1P61221 599 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms