RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 TCF15Q12870 199 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 CDC16Q13042 620 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 TERF2Q15554 542 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 RBBP7Q16576 425 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 SH2D4BQ5SQS7 431 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 KANK2Q63ZY3 851 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 CLEC6AQ6EIG7 209 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 TCEAL6Q6IPX3 200 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 CAPN13Q6MZZ7 669 aaPredicted RBP6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 LETMD1Q6P1Q0 360 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 ZC3H14Q6PJT7 736 aaKnown RBP6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 C8orf86Q6ZUL3 223 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 GPRIN3Q6ZVF9 776 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 SLC9B2Q86UD5 537 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 AMIGO1Q86WK6 493 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 GATAD2AQ86YP4 633 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 WDR75Q8IWA0 830 aaKnown RBP6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 TRIM48Q8IWZ4 208 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 ADGRF3Q8IZF5 1079 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 CLYBLQ8N0X4 340 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 DCBLD1Q8N8Z6 715 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 SNX31Q8N9S9 440 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 SUMF1Q8NBK3 374 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 GPR156Q8NFN8 814 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 OR4F6Q8NGB9 312 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 OR4E2Q8NGC2 313 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 OR2A1Q8NGT9 310 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 PIWIL2Q8TC59 973 aaKnown RBP6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 MAPK15Q8TD08 544 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 ZNF473Q8WTR7 871 aaKnown RBP6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 SETD7Q8WTS6 366 aaKnown RBP6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 LCN9Q8WX39 176 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 SMPDL3AQ92484 453 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 TCEAL3Q969E4 200 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 NEIL2Q969S2 332 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 GRAMD1AQ96CP6 724 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 PRR11Q96HE9 360 aaPredicted RBP6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 KCNA7Q96RP8 456 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 MIPEPQ99797 713 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 NTMT1Q9BV86 223 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 RAB11FIP5Q9BXF6 653 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 SRMSQ9H3Y6 488 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 CCDC177Q9NQR7 707 aaPredicted RBP6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 ABCF3Q9NUQ8 709 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 SPHK1Q9NYA1 384 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 CRIM1Q9NZV1 1036 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 PCDHB10Q9UN67 800 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 RNF11Q9Y3C5 154 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 ANGPTL3Q9Y5C1 460 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 PCDHGA5Q9Y5G8 931 aa6.78□□□□□ -1.32
LSM3P3-201ENST00000436601 KCNE1BA0A087WTH5 132 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 MEGF11A6BM72 1044 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 ZNF839A8K0R7 811 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 TRIM38O00635 465 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 AZIN1O14977 448 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 KDM1AO60341 852 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 SNX3O60493 162 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 WFS1O76024 890 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 CLDN9O95484 217 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 DLGAP3O95886 979 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 CAPN1P07384 714 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 CHRM5P08912 532 aaPredicted RBP6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 EBLN1P0CF75 366 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 MYF5P13349 255 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 ALOX15P16050 662 aaPredicted RBP6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 ENGP17813 658 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 CD22P20273 847 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 CCND1P24385 295 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 PSMB5P28074 263 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 SERPINB3P29508 390 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 CASP2P42575 452 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 FASLGP48023 281 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 AQP5P55064 265 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 HHEXQ03014 270 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 CHIT1Q13231 466 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 TSTA3Q13630 321 aaPredicted RBP6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 DOC2AQ14183 400 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 E2F2Q14209 437 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 C14orf28Q4W4Y0 310 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 TCHHL1Q5QJ38 904 aaPredicted RBP6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 CATSPEREQ5SY80 951 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 VWA5B1Q5TIE3 1220 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 PRAMEF13Q5VWM6 474 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 LAIR1Q6GTX8 287 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 IL27RAQ6UWB1 636 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 LCTLQ6UWM7 567 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 TMEM26Q6ZUK4 368 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 SPATA21Q7Z572 469 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 MILR1Q7Z6M3 343 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 ZNF761Q86XN6 746 aaPredicted RBP6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 DMRTC2Q8IXT2 367 aaPredicted RBP6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 RBM12BQ8IXT5 1001 aaKnown RBP6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 RAB42Q8N4Z0 105 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 ARL10Q8N8L6 244 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 CDYL2Q8N8U2 506 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 L3MBTL4Q8NA19 623 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 KYQ8NBH2 561 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 FLVCR1-AS1Q8TAF5 88 aa6.77□□□□□ -1.33
LSM3P3-201ENST00000436601 BCAS4Q8TDM0 211 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms