RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 DPH2Q9BQC3 489 aaPredicted RBP7.24□□□□□ -1.25
CPSF6-202ENST00000435070 INPP5KQ9BT40 448 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 SPON2Q9BUD6 331 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 ELP3Q9H9T3 547 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 CAPN10Q9HC96 672 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 HOXC10Q9NYD6 342 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 UPK3BL1B0FP48 263 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 UPK3BL2E5RIL1 263 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 PSMD3O43242 534 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 GUCA1CO95843 209 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 CYP17A1P05093 508 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 DNAJA1P31689 397 aaKnown RBP7.24□□□□□ -1.25
CPSF6-202ENST00000435070 UGT8Q16880 541 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 DOK6Q6PKX4 331 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 RANBP10Q6VN20 620 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 SPATA2LQ8IUW3 424 aaPredicted RBP7.24□□□□□ -1.25
CPSF6-202ENST00000435070 AADATQ8N5Z0 425 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 OR56A4Q8NGH8 313 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 HASPINQ8TF76 798 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 FCRL5Q96RD9 977 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 COLEC11Q9BWP8 271 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 SLC39A8Q9C0K1 460 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 KCNN2Q9H2S1 579 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF304Q9HCX3 659 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 CHMP1AQ9HD42 196 aaPredicted RBP7.24□□□□□ -1.25
CPSF6-202ENST00000435070 CACNG4Q9UBN1 327 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 KIAA1217Q5T5P2 1943 aa7.24□□□□□ -1.25
CPSF6-202ENST00000435070 TRAPPC2P0DI81 140 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 TRAPPC2BP0DI82 140 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 FPR1P21462 350 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 CASP9P55211 416 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 NRG3P56975 720 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 CTAG1AP78358 180 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 ABRAXAS2Q15018 415 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 INO80DQ53TQ3 878 aaPredicted RBP7.23□□□□□ -1.25
CPSF6-202ENST00000435070 XRRA1Q6P2D8 792 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 SNX20Q7Z614 316 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 GPR149Q86SP6 731 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 OR8J3Q8NGG0 315 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 FARSBQ9NSD9 589 aaKnown RBP7.23□□□□□ -1.25
CPSF6-202ENST00000435070 ARL5AQ9Y689 179 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 TOR1AO14656 332 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 GLP2RO95838 553 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 PROS1P07225 676 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 AKAP5P24588 427 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 MAP2K3P46734 347 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 DSC2Q02487 901 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 HNRNPA0Q13151 305 aaKnown RBP7.23□□□□□ -1.25
CPSF6-202ENST00000435070 AKIRIN2Q53H80 203 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 SLC35F1Q5T1Q4 408 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 LRRC66Q68CR7 880 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF57Q68EA5 555 aaPredicted RBP7.23□□□□□ -1.25
CPSF6-202ENST00000435070 C11orf96Q7Z7L8 435 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 MICALL2Q8IY33 904 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 NARS2Q96I59 477 aaKnown RBP7.23□□□□□ -1.25
CPSF6-202ENST00000435070 TSSK3Q96PN8 268 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 IL4I1Q96RQ9 567 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 FEVQ99581 238 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 GPR21Q99679 349 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 STOML2Q9UJZ1 356 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 NEUROG3Q9Y4Z2 214 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 A0A1W2PRG6 482 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 MYL12BO14950 172 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 LRRTM2O43300 516 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 GJB3O75712 270 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 PRR35P0CG20 571 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 MYL12AP19105 171 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 TALDO1P37837 337 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 RPL35P42766 123 aaKnown RBP7.23□□□□□ -1.25
CPSF6-202ENST00000435070 LRRC32Q14392 662 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 MSANTD2Q6P1R3 559 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 APOBEC3FQ8IUX4 373 aaKnown RBP7.23□□□□□ -1.25
CPSF6-202ENST00000435070 TCTE3Q8IZS6 198 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 LIX1Q8N485 282 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 SLAIN1Q8ND83 568 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 COPS5Q92905 334 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 PRKD2Q9BZL6 878 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 TMEM245Q9H330 911 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.23□□□□□ -1.25
CPSF6-202ENST00000435070 CD3EAPO15446 510 aaKnown RBP7.23□□□□□ -1.25
CPSF6-202ENST00000435070 TOXO94900 526 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 ALDH1A1P00352 501 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 CAPZA2P47755 286 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 RORCP51449 518 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 HMGCS2P54868 508 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 RGS1Q08116 209 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 XKR7Q5GH72 579 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 TMEM81Q6P7N7 255 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 EIF3MQ7L2H7 374 aaKnown RBP7.23□□□□□ -1.25
CPSF6-202ENST00000435070 ZNF280BQ86YH2 543 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 RDH10Q8IZV5 341 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 B3GNT7Q8NFL0 401 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 ABHD16BQ9H3Z7 469 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 NIPAL2Q9H841 368 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 ASAH2Q9NR71 780 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 CMAHPQ9Y471 501 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 TIMM13Q9Y5L4 95 aaPredicted RBP7.23□□□□□ -1.25
CPSF6-202ENST00000435070 PPP2R3BQ9Y5P8 575 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 AOC2O75106 756 aa7.23□□□□□ -1.25
CPSF6-202ENST00000435070 HRGP04196 525 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms