RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 TAPBPO15533 448 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 OR1F1O43749 312 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 NUDT17P0C025 328 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 LIFP15018 202 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 TAC1P20366 129 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 SLC6A12P48065 614 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 CSRP3P50461 194 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 ALDH18A1P54886 795 aaKnown RBP14.84□□□□□ -0.03
TREX1-201ENST00000433541 CXADRP78310 365 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 CSNK1G2P78368 415 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 TLE3Q04726 772 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 SLC9A5Q14940 896 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 ZXDCQ2QGD7 858 aaPredicted RBP14.84□□□□□ -0.03
TREX1-201ENST00000433541 FAM214AQ32MH5 1076 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 FBXO42Q6P3S6 717 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 FAM199XQ6PEV8 388 aaPredicted RBP14.84□□□□□ -0.03
TREX1-201ENST00000433541 LRRC70Q7Z2Q7 622 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 TDRPQ86YL5 185 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 MYLK4Q86YV6 388 aaPredicted RBP14.84□□□□□ -0.03
TREX1-201ENST00000433541 RIBC1Q8N443 379 aaPredicted RBP14.84□□□□□ -0.03
TREX1-201ENST00000433541 ACMSDQ8TDX5 336 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 PHF21BQ96EK2 531 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 MRPL57Q9BQC6 102 aaKnown RBP14.84□□□□□ -0.03
TREX1-201ENST00000433541 EFHD1Q9BUP0 239 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 CAPS2Q9BXY5 557 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 CD244Q9BZW8 370 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 MRPL46Q9H2W6 279 aaKnown RBP14.84□□□□□ -0.03
TREX1-201ENST00000433541 PELI2Q9HAT8 420 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 RRAGDQ9NQL2 400 aaPredicted RBP14.84□□□□□ -0.03
TREX1-201ENST00000433541 PTBP2Q9UKA9 531 aaKnown RBP14.84□□□□□ -0.03
TREX1-201ENST00000433541 CROTQ9UKG9 612 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 FER1L5A0AVI2 2057 aa14.84□□□□□ -0.03
TREX1-201ENST00000433541 LOC101059948A0A1B0GTJ6 334 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 A0A1W2PPM1 405 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 HYKKA2RU49 373 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 FOXO6A8MYZ6 492 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 TXNDC9O14530 226 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 SLC35G6P0C7Q6 338 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 AGTR2P50052 363 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 RPS15P62841 145 aaKnown RBP14.83□□□□□ -0.04
TREX1-201ENST00000433541 SRSF6Q13247 344 aaKnown RBP14.83□□□□□ -0.04
TREX1-201ENST00000433541 MUM1Q2TAK8 710 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 HKDC1Q2TB90 917 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 KRT71Q3SY84 523 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 XKR6Q5GH73 641 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 RHBDD2Q6NTF9 364 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 NXPE4Q6UWF7 544 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 DSELQ8IZU8 1212 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 KRT78Q8N1N4 520 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 MREGQ8N565 214 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 METTL27Q8N6F8 245 aaPredicted RBP14.83□□□□□ -0.04
TREX1-201ENST00000433541 TEX9Q8N6V9 391 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 PTGR2Q8N8N7 351 aaPredicted RBP14.83□□□□□ -0.04
TREX1-201ENST00000433541 CCDC63Q8NA47 563 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 SLC38A9Q8NBW4 561 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 CT55Q8WUE5 264 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 CCT6BQ92526 530 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 GPR78Q96P69 363 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 IQCGQ9H095 443 aaKnown RBP14.83□□□□□ -0.04
TREX1-201ENST00000433541 CENPHQ9H3R5 247 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 CPNE5Q9HCH3 593 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 TMCO1Q9UM00 188 aa14.83□□□□□ -0.04
TREX1-201ENST00000433541 USP24Q9UPU5 2620 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 A0A1B0GX78 115 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 TRBC2A0A5B9 178 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 K7EPI3 171 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 COPEO14579 308 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 MAP2K7O14733 419 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 DSCR3O14972 297 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 NDUFS4O43181 175 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 GLRA3O75311 464 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 C1GALT1C1LP0DN25 315 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 EPB42P16452 691 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 CXCR2P25025 360 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 VARSP26640 1264 aaKnown RBP14.82□□□□□ -0.04
TREX1-201ENST00000433541 GGT5P36269 586 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 BCL6P41182 706 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 CYP4F2P78329 520 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 IRF8Q02556 426 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 DNASE1L3Q13609 305 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 SLBPQ14493 270 aaKnown RBP eCLIP14.82□□□□□ -0.04
TREX1-201ENST00000433541 SETDB1Q15047 1291 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 NDUFA9Q16795 377 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 ARHGAP40Q5TG30 622 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 MLIPQ5VWP3 458 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 C16orf46Q6P387 395 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 LCA5Q86VQ0 697 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 CYP4X1Q8N118 509 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 C4orf33Q8N1A6 199 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 CAMKVQ8NCB2 501 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 ABHD11Q8NFV4 315 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 ZCCHC10Q8TBK6 192 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 PROKR1Q8TCW9 393 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 SLC13A3Q8WWT9 602 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 ATP6V1E2Q96A05 226 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 THAP11Q96EK4 314 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 LRFN5Q96NI6 719 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 OR2A5Q96R48 311 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 C17orf62Q9BQA9 187 aa14.82□□□□□ -0.04
TREX1-201ENST00000433541 DPH2Q9BQC3 489 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms