RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SH3BGRLO75368 114 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 OR2B3O76000 313 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 HOXC13P31276 330 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 GZMMP51124 257 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 VMACQ2NL98 169 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 TIMM50Q3ZCQ8 353 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 FBXO43Q4G163 708 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 AFMIDQ63HM1 303 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 TAPT1Q6NXT6 567 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 EIF3MQ7L2H7 374 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 UMODL1-AS1Q8N2C9 162 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 OR52E4Q8NGH9 312 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 SERHLQ9NQF3 203 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 TMEM45AQ9NWC5 275 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 ARIH1Q9Y4X5 557 aaPredicted RBP11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 FABP12A6NFH5 140 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 UNCXA6NJT0 531 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 SCAMP3O14828 347 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 WNT9AO14904 365 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 STX7O15400 261 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 NUDT7P0C024 238 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 TSPAN19P0C672 248 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 GGT2P36268 569 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 QPRTQ15274 297 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 PTRHD1Q6GMV3 140 aaKnown RBP11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 SCD5Q86SK9 330 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 OR8H1Q8NGG4 311 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 TMEM203Q969S6 136 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 BARHL1Q9BZE3 327 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 LATS2Q9NRM7 1088 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 NLE1Q9NVX2 485 aaPredicted RBP11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 NUDT4Q9NZJ9 180 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 CCL27Q9Y4X3 112 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 PLK4O00444 970 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 FPGTO14772 594 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 IGLV3-25P01717 112 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 THP07101 528 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 PBX3P40426 434 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 CDH12P55289 794 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 TBX4P57082 545 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 VEPH1Q14D04 833 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 ZNF79Q15937 498 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 MS4A13Q5J8X5 152 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 FBXL22Q6P050 247 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 PLET1Q6UQ28 207 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 AGMOQ6ZNB7 445 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 VN1R5Q7Z5H4 357 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 OR6J1Q8NGC5 347 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 ANGPTL6Q8NI99 470 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 SETD6Q8TBK2 473 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 SELENOMQ8WWX9 145 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 APOLD1Q96LR9 279 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 IL4I1Q96RQ9 567 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 NIPSNAP1Q9BPW8 284 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 GON7Q9BXV9 100 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 HDHD5Q9BXW7 423 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 ELOVL2Q9NXB9 296 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 TSC2P49815 1807 aa11.19□□□□□ -0.62
HMGCS1-202ENST00000433297 B4DXG7 233 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 CDK2AP1O14519 115 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 AP2A2O94973 939 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 CYP2A6P11509 494 aaPredicted RBP11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 RHOQP17081 205 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 RORCP51449 518 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 C19orf57Q0VDD7 668 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 NFE2L1Q14494 772 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 LRRC66Q68CR7 880 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 GRAMD2AQ8IUY3 354 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 SLC34A3Q8N130 599 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 TMEM86AQ8N2M4 240 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 CLDN19Q8N6F1 224 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 ANKK1Q8NFD2 765 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 OR10G2Q8NGC3 310 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 TRPM4Q8TD43 1214 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 RNF121Q9H920 327 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 KCNN3Q9UGI6 736 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 AP3M1Q9Y2T2 418 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 TRBV5-3A0A0A0MS03 114 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 A0A0D9SEW6 157 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 POLR1CO15160 346 aaPredicted RBP11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 POMCP01189 267 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 TTPAP49638 278 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 POU6F2P78424 691 aaPredicted RBP11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 ALDH6A1Q02252 535 aaKnown RBP11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 CDONQ4KMG0 1287 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 METTL23Q86XA0 190 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 ZZZ3Q8IYH5 903 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 DTX3Q8N9I9 347 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 PCNPQ8WW12 178 aaKnown RBP11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 PITX2Q99697 317 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 CIPCQ9C0C6 399 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 ATP13A2Q9NQ11 1180 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 ZNF226Q9NYT6 803 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 KLK4Q9Y5K2 254 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 V9GYH0 126 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 DNAJC25-GNG10A0A024R161 153 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 SUV39H1O43463 412 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 ONECUT3O60422 494 aaPredicted RBP11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 TSPAN9O75954 239 aa11.18□□□□□ -0.62
HMGCS1-202ENST00000433297 EPN2O95208 641 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms