RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 NKAIN1Q4KMZ8 207 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 TLDC1Q6P9B6 456 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 TTLL10Q6ZVT0 673 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 TDRPQ86YL5 185 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 CENPLQ8N0S6 344 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-204ENST00000430071 METTL27Q8N6F8 245 aaPredicted RBP16.2■□□□□ 0.18
UBE3D-204ENST00000430071 PPFIBP2Q8ND30 876 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 OR2L3Q8NG85 312 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 OR9A1PQ8NGU1 263 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 MZB1Q8WU39 189 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 PKP4Q99569 1192 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 SLC25A23Q9BV35 468 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 DERL2Q9GZP9 239 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 MLXIPLQ9NP71 852 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 ACSS2Q9NR19 701 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 IGSF5Q9NSI5 407 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 TBK1Q9UHD2 729 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 PLAAQ9Y263 795 aa16.2■□□□□ 0.18
UBE3D-204ENST00000430071 PTRH2Q9Y3E5 179 aaKnown RBP16.2■□□□□ 0.18
UBE3D-204ENST00000430071 A0A096LPK6 155 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 A0A0J9YVX5 310 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 FOXO6A8MYZ6 492 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 C9J4A7 227 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 SLC16A5O15375 505 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 ZBTB14O43829 449 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 ERLIN1O75477 346 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 UMODP07911 640 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 ERGP11308 486 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 CD1DP15813 335 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 VSX2P58304 361 aaPredicted RBP16.19■□□□□ 0.18
UBE3D-204ENST00000430071 DCDP81605 110 aaKnown RBP16.19■□□□□ 0.18
UBE3D-204ENST00000430071 KLRB1Q12918 225 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 SP140Q13342 867 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 RAPSNQ13702 412 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 CSHL1Q14406 222 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 TSNQ15631 228 aaKnown RBP16.19■□□□□ 0.18
UBE3D-204ENST00000430071 PPP1R3AQ16821 1122 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 NADK2Q4G0N4 442 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 BEND6Q5SZJ8 279 aaPredicted RBP16.19■□□□□ 0.18
UBE3D-204ENST00000430071 LGSNQ5TDP6 509 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 MRPL14Q6P1L8 145 aaKnown RBP16.19■□□□□ 0.18
UBE3D-204ENST00000430071 SBSNQ6UWP8 590 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 MBOAT1Q6ZNC8 495 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 TIFABQ6ZNK6 161 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 COX15Q7KZN9 410 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 ZGRF1Q86YA3 2104 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 CYP4X1Q8N118 509 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 FDCSPQ8NFU4 85 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 HMGCLL1Q8TB92 370 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 MAGEC3Q8TD91 643 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 KCTD4Q8WVF5 259 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 ANKRD7Q92527 254 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 SLC22A18Q96BI1 424 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 PTERQ96BW5 349 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 ZNF285Q96NJ3 590 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 DPH2Q9BQC3 489 aaPredicted RBP16.19■□□□□ 0.18
UBE3D-204ENST00000430071 MESP1Q9BRJ9 268 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 NDC1Q9BTX1 674 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 NUDT9Q9BW91 350 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 PPCSQ9HAB8 311 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 PARVBQ9HBI1 364 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 TXLNGQ9NUQ3 528 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 IFT80Q9P2H3 777 aaPredicted RBP16.19■□□□□ 0.18
UBE3D-204ENST00000430071 NDOR1Q9UHB4 597 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 ACOT9Q9Y305 439 aa16.19■□□□□ 0.18
UBE3D-204ENST00000430071 UTP20O75691 2785 aaKnown RBP16.19■□□□□ 0.18
UBE3D-204ENST00000430071 A0A087X1B8 175 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 IGKV1-8A0A0C4DH67 115 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 IQANK1A0A1B0GTG1 560 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 CEACAM4O75871 244 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 SLC16A8O95907 504 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 SYF2O95926 243 aaKnown RBP16.18■□□□□ 0.18
UBE3D-204ENST00000430071 SLC26A3P40879 764 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 FOXK1P85037 733 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 IFFO1Q0D2I5 559 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 RASA2Q15283 850 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 FBXO42Q6P3S6 717 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 MRGPREQ86SM8 312 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 TBC1D1Q86TI0 1168 aaPredicted RBP16.18■□□□□ 0.18
UBE3D-204ENST00000430071 PROKR1Q8TCW9 393 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 NXNL1Q96CM4 212 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 MTBPQ96DY7 904 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 RAB11FIP5Q9BXF6 653 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 VPS11Q9H270 941 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 CUTCQ9NTM9 273 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 ICE1Q9Y2F5 2266 aa16.18■□□□□ 0.18
UBE3D-204ENST00000430071 CYSRT1A8MQ03 144 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 CDH16O75309 829 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 ALOX12BO75342 701 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 LTA4HP09960 611 aaKnown RBP16.17■□□□□ 0.18
UBE3D-204ENST00000430071 OR1D4P47884 311 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 ATP6V0D1P61421 351 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 SNRPNP63162 240 aaKnown RBP16.17■□□□□ 0.18
UBE3D-204ENST00000430071 TSTA3Q13630 321 aaPredicted RBP16.17■□□□□ 0.18
UBE3D-204ENST00000430071 OR4D1Q15615 310 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 WASHC2DQ5SRD0 308 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 SHISA6Q6ZSJ9 500 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 PPP1R32Q7Z5V6 425 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 CCDC91Q7Z6B0 441 aa16.17■□□□□ 0.18
UBE3D-204ENST00000430071 IQCKQ8N0W5 287 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms