RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 IL18R1Q13478 541 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 HIST2H2ACQ16777 129 aaPredicted RBP13.22□□□□□ -0.29
THBS3-202ENST00000428962 VMACQ2NL98 169 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 LRRC23Q53EV4 343 aaPredicted RBP13.22□□□□□ -0.29
THBS3-202ENST00000428962 CPTPQ5TA50 214 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 HIST2H2AA3Q6FI13 130 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 ZCCHC8Q6NZY4 707 aaKnown RBP13.22□□□□□ -0.29
THBS3-202ENST00000428962 SLCO4C1Q6ZQN7 724 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 TMPRSS11BQ86T26 416 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 CLVS1Q8IUQ0 354 aaPredicted RBP13.22□□□□□ -0.29
THBS3-202ENST00000428962 SYTL1Q8IYJ3 562 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 LILRA3Q8N6C8 439 aaPredicted RBP13.22□□□□□ -0.29
THBS3-202ENST00000428962 C1orf52Q8N6N3 182 aaKnown RBP13.22□□□□□ -0.29
THBS3-202ENST00000428962 VN1R2Q8NFZ6 395 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 HDAC2Q92769 488 aaKnown RBP13.22□□□□□ -0.29
THBS3-202ENST00000428962 ARRDC3Q96B67 414 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 WDR34Q96EX3 536 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 LINC00615Q96LM1 132 aaPredicted RBP13.22□□□□□ -0.29
THBS3-202ENST00000428962 ASPSCR1Q9BZE9 553 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 EHD1Q9H4M9 534 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 FAM118AQ9NWS6 357 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 DEC1Q9P2X7 70 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 PCDHB11Q9Y5F2 797 aa13.22□□□□□ -0.29
THBS3-202ENST00000428962 C17orf113A0A1B0GUU1 675 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 FOXE1O00358 373 aaPredicted RBP13.21□□□□□ -0.29
THBS3-202ENST00000428962 SPINT1O43278 529 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 HS6ST1O60243 411 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 LZTS3O60299 673 aaPredicted RBP13.21□□□□□ -0.29
THBS3-202ENST00000428962 NOL3O60936 208 aaKnown RBP13.21□□□□□ -0.29
THBS3-202ENST00000428962 SCN2BO60939 215 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 CPSF4O95639 269 aaKnown RBP13.21□□□□□ -0.29
THBS3-202ENST00000428962 ZNF682O95780 498 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 B3GALT4O96024 378 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 SOD1P00441 154 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 C6P13671 934 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 ADRB3P13945 408 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 RPL3P39023 403 aaKnown RBP13.21□□□□□ -0.29
THBS3-202ENST00000428962 PHEXP78562 749 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 TOP3AQ13472 1001 aaPredicted RBP13.21□□□□□ -0.29
THBS3-202ENST00000428962 LAPTM5Q13571 262 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 ZC3H12BQ5HYM0 836 aaKnown RBP13.21□□□□□ -0.29
THBS3-202ENST00000428962 C9orf64Q5T6V5 341 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 BROXQ5VW32 411 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 SHQ1Q6PI26 577 aaKnown RBP13.21□□□□□ -0.29
THBS3-202ENST00000428962 TMEM26Q6ZUK4 368 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 GPR155Q7Z3F1 870 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 DSG4Q86SJ6 1040 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 ZZZ3Q8IYH5 903 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 CFAP206Q8IYR0 622 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 TDHQ8IZJ6 230 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 C10orf111Q8N326 155 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 ARL10Q8N8L6 244 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 OR9A1PQ8NGU1 263 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 HUS1BQ8NHY5 278 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 ZNF480Q8WV37 535 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 CHTF18Q8WVB6 975 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 SNX19Q92543 992 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 NEIL2Q969S2 332 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 NXPE3Q969Y0 559 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 ISOC1Q96CN7 298 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 CNDP2Q96KP4 475 aaKnown RBP13.21□□□□□ -0.29
THBS3-202ENST00000428962 LRRC3BQ96PB8 259 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 PHF12Q96QT6 1004 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 MBOAT4Q96T53 435 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 GABARAPL1Q9H0R8 117 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 OR2AG1Q9H205 316 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 MTIF3Q9H2K0 278 aaKnown RBP13.21□□□□□ -0.29
THBS3-202ENST00000428962 POLR1BQ9H9Y6 1135 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 SMURF2Q9HAU4 748 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 TRIM39Q9HCM9 518 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 TM9SF3Q9HD45 589 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 BAG5Q9UL15 447 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 COQ6Q9Y2Z9 468 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 MAGED1Q9Y5V3 778 aaPredicted RBP13.21□□□□□ -0.29
THBS3-202ENST00000428962 GMEB1Q9Y692 573 aa13.21□□□□□ -0.29
THBS3-202ENST00000428962 GNG14A0A1W2PPG7 69 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 VEGFDO43915 354 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 PCDH7O60245 1069 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 LILRB5O75023 590 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 EEF1B2P24534 225 aaKnown RBP13.2□□□□□ -0.3
THBS3-202ENST00000428962 SHMT2P34897 504 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 RPS6KA3P51812 740 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 IST1P53990 364 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 NUP107P57740 925 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 GABARAPL2P60520 117 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 RAE1P78406 368 aaKnown RBP13.2□□□□□ -0.3
THBS3-202ENST00000428962 SLC14A1Q13336 389 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 CAMK1Q14012 370 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 VEZF1Q14119 521 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 TMEM52BQ4KMG9 183 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 AP1ARQ63HQ0 302 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 GALNT18Q6P9A2 607 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 KCTD8Q6ZWB6 473 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 NPAS3Q8IXF0 933 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 FOXJ1Q92949 421 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 UBE2E3Q969T4 207 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 NRBF2Q96F24 287 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 SGPP1Q9BX95 441 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 DPEP2Q9H4A9 486 aa13.2□□□□□ -0.3
THBS3-202ENST00000428962 CXorf21Q9HAI6 301 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms