RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 MMP21Q8N119 569 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 POU5F2Q8N7G0 328 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 FLVCR1-AS1Q8TAF5 88 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 SETD7Q8WTS6 366 aaKnown RBP9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 UCN3Q969E3 161 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 PTCD3Q96EY7 689 aaKnown RBP9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 TEX37Q96LM6 180 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 C7orf26Q96N11 449 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 OR2A14Q96R47 310 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 MAP3K3Q99759 626 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 BATF3Q9NR55 127 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 KLHL42Q9P2K6 505 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 RAP2CQ9Y3L5 183 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 NCOR2Q9Y618 2525 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 A0A0J9YVX5 310 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 PIPSLA2A3N6 862 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 SDHDO14521 159 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 B4GAT1O43505 415 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 HYAL3O43820 417 aaPredicted RBP9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 EIF2S1P05198 315 aaKnown RBP9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 ALDOCP09972 364 aaKnown RBP9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 UGT2B7P16662 529 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 CLNS1AP54105 237 aaKnown RBP9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 RFTN2Q52LD8 501 aaPredicted RBP9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 CAPN13Q6MZZ7 669 aaPredicted RBP9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 Q6ZSR9 355 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 KANSL1Q7Z3B3 1105 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 VN1R5Q7Z5H4 357 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 LCA5Q86VQ0 697 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 GKN2Q86XP6 184 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 AVL9Q8NBF6 648 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 OR2L3Q8NG85 312 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 CCDC74AQ96AQ1 378 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 MIEF2Q96C03 454 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 EGLN2Q96KS0 407 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 SLC38A3Q99624 504 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 SGPP1Q9BX95 441 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 ACPTQ9BZG2 426 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 TRIM8Q9BZR9 551 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 AICDAQ9GZX7 198 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 PCED1AQ9H1Q7 454 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 KLHL31Q9H511 634 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 AKTIPQ9H8T0 292 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 POLG2Q9UHN1 485 aa9.15□□□□□ -0.94
HMGCLL1-206ENST00000428842 IGHV5-51A0A0C4DH38 117 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 OR2W5A6NFC9 320 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 SLC16A5O15375 505 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 NPHS1O60500 1241 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 ENO2P09104 434 aaPredicted RBP9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 AMD1P17707 334 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 ARFIP2P53365 341 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 ATXN3P54252 364 aaPredicted RBP9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 KRT72Q14CN4 511 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 CMPK2Q5EBM0 449 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 PRSS41Q7RTY9 318 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 LSRQ86X29 649 aaPredicted RBP9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 METTL27Q8N6F8 245 aaPredicted RBP9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 CDC26Q8NHZ8 85 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 FBXO27Q8NI29 283 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 TUBGCP3Q96CW5 907 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 SLC6A14Q9UN76 642 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 MRPS2Q9Y399 296 aaKnown RBP9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 POLR3HQ9Y535 204 aaPredicted RBP9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 LRRC42Q9Y546 428 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 COLEC10Q9Y6Z7 277 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 KCNE1BA0A087WTH5 132 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 LOC100653049A0A140TA62 436 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 MYOCOSA0A1B0GUC4 107 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 SLC9B1P1A6NJY1 282 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 RHPN2P1A8MT19 583 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 EIF3FO00303 357 aaPredicted RBP9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 CAPN5O15484 640 aaPredicted RBP9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 OR1F1O43749 312 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 PRICKLE3O43900 615 aaPredicted RBP9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 PRKRAO75569 313 aaKnown RBP9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 KRT34O76011 436 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 UBXN7O94888 489 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 LRATO95237 230 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 CLDN9O95484 217 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 C1QCP02747 245 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 HGFP14210 728 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 XRCC1P18887 633 aaPredicted RBP9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 TACR1P25103 407 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 SERPINB5P36952 375 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 BCL6P41182 706 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 HNMTP50135 292 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 HK2P52789 917 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 PRKAA1Q13131 559 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 PTGR1Q14914 329 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 HKDC1Q2TB90 917 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 ZNF528Q3MIS6 628 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 C6orf132Q5T0Z8 1188 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 KANK2Q63ZY3 851 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 ANKRD26P1Q6NSI1 321 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 SLC23A3Q6PIS1 610 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 TREML1Q86YW5 311 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 KCT2Q8NC54 265 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 OR7G3Q8NG95 312 aa9.14□□□□□ -0.95
HMGCLL1-206ENST00000428842 HUS1BQ8NHY5 278 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms