RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 GIMAP2Q9UG22 337 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 CCNL1Q9UK58 526 aaPredicted RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 SMAD6O43541 496 aaKnown RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 ATG13O75143 517 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 GBX2P52951 348 aaPredicted RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 PTGR1Q14914 329 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 PHC2Q8IXK0 858 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 GHDCQ8N2G8 530 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 OR4M2Q8NGB6 313 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 OR2T11Q8NH01 316 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 ZNF675Q8TD23 568 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 PABPC5Q96DU9 382 aaKnown RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 EPYCQ99645 322 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 CPPED1Q9BRF8 314 aaPredicted RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 CLMPQ9H6B4 373 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 NRBP2Q9NSY0 501 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 TMEM30AQ9NV96 361 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 YJEFN3A6XGL0 299 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 STX7O15400 261 aaKnown RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 HS6ST1O60243 411 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 KIAA0513O60268 411 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 EPN2O95208 641 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 C9P02748 559 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 IL6P05231 212 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 HBQ1P09105 142 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 PIPP12273 146 aaPredicted RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 CKMT1AP12532 417 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 CLDN8P56748 225 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 DAOAP59103 153 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 GOLGA7BQ2TAP0 167 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 GPR139Q6DWJ6 353 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 ZNF730Q6ZMV8 503 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 ABI1Q8IZP0 508 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 DEDD2Q8WXF8 326 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 ASB15Q8WXK1 588 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 TESCQ96BS2 214 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 KCNA7Q96RP8 456 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 COQ7Q99807 217 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 ASPNQ9BXN1 380 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 SLC23A1Q9UHI7 598 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 UBA6A0AVT1 1052 aaPredicted RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 SGK494L7N484 410 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 PIRO00625 290 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 MAGP20916 626 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 GALP22466 123 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 RPS19P39019 145 aaKnown RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 ARHGDIAP52565 204 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ITGA1P56199 1179 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ADIGQ0VDE8 80 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ST3GAL4Q11206 333 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ZNF273Q14593 569 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 TAB1Q15750 504 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 GPR19Q15760 415 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 SLC25A30Q5SVS4 291 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 RAP1GAP2Q684P5 730 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 PLAG1Q6DJT9 500 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 MSANTD1Q6ZTZ1 278 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 NIM1KQ8IY84 436 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 SPATA6LQ8N4H0 392 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 PTGR2Q8N8N7 351 aaPredicted RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 C6orf62Q9GZU0 229 aaPredicted RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 ZNF277Q9NRM2 450 aaPredicted RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 U3KQV3 271 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ARRDC5A6NEK1 342 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 QSOX1O00391 747 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 PRMT3O60678 531 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 SLC43A1O75387 559 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 IGHA2P01877 340 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 SCG5P05408 212 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 CCNYL3P0C7X3 344 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 LILRA4P59901 499 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ERVPABLB-1P60509 514 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 CREMQ03060 361 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 TPBGQ13641 420 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ZNF628Q5EBL2 1059 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 FAM9CQ8IZT9 166 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 LINC00469Q8N7U9 141 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 USP7Q93009 1102 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ACAT2Q9BWD1 397 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 C12orf4Q9NQ89 552 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ITM2CQ9NQX7 267 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 RNF19AQ9NV58 838 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ING3Q9NXR8 418 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 PHF11Q9UIL8 331 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 LOC100506127A0A0U1RQW1 187 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 CXCR6O00574 342 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 PER2O15055 1255 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 TPST2O60704 377 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 HCN1O60741 890 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ZNF250P15622 560 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 TPH1P17752 444 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 TSPAN8P19075 237 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 OGNP20774 298 aaKnown RBP4.98□□□□□ -1.61
RIF1-203ENST00000428287 EVX1P49640 407 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 HK3P52790 923 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 PER3P56645 1201 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 BACE1P56817 501 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 DOK7Q18PE1 504 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 ARHGAP15Q53QZ3 475 aa4.98□□□□□ -1.61
RIF1-203ENST00000428287 SIX5Q8N196 739 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms