RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 ATG9BQ674R7 924 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 RAP1GAP2Q684P5 730 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 USP17L6PQ6QN14 398 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM107Q6UX40 140 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 BAIAP2L2Q6UXY1 529 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 C3P1Q6ZMU1 363 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 CCDC149Q6ZUS6 474 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM183BPQ6ZVS7 135 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 RBM23Q86U06 439 aaKnown RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 C12orf40Q86WS4 652 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 XYLT1Q86Y38 959 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 PDZD9Q8IXQ8 264 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM126BQ8IXS8 530 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 SVBPQ8N300 66 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 DTX3Q8N9I9 347 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 UXS1Q8NBZ7 420 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 PLA2G15Q8NCC3 412 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 GMCL1P1Q8NEA9 526 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR4M1Q8NGD0 313 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 CNIH3Q8TBE1 160 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 SCARB1Q8WTV0 552 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 NSMAFQ92636 917 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 CENPIQ92674 756 aaPredicted RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 RIT1Q92963 219 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 CPNE4Q96A23 557 aaPredicted RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZBED3Q96IU2 234 aaPredicted RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 COQ10AQ96MF6 247 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 TEPSINQ96N21 525 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 SIGLEC11Q96RL6 698 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 NPAS1Q99742 590 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 CHCHD6Q9BRQ6 235 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 GINS4Q9BRT9 223 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 TTPALQ9BTX7 342 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ASPNQ9BXN1 380 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 GABARAPL3Q9BY60 117 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 NIFKQ9BYG3 293 aaKnown RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 MAGEB5Q9BZ81 275 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZYG11BQ9C0D3 744 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 POLR1EQ9GZS1 481 aaKnown RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 C11orf54Q9H0W9 315 aaPredicted RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 C11orf49Q9H6J7 331 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 MINDY3Q9H8M7 445 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 REEP1Q9H902 201 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 IL1RL2Q9HB29 575 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 PLAC1Q9HBJ0 212 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 C11orf16Q9NQ32 467 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 GPRC5CQ9NQ84 441 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 TLR9Q9NR96 1032 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 EXD2Q9NVH0 621 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 AIG1Q9NVV5 245 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 MTMR10Q9NXD2 777 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 BABAM2Q9NXR7 383 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 COA4Q9NYJ1 87 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 PPP4R1LQ9P1A2 415 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 HCN3Q9P1Z3 774 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ARHGAP28Q9P2N2 729 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ASH2LQ9UBL3 628 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 IKZF3Q9UKT9 509 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 AGO1Q9UL18 857 aaKnown RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ENTPD4Q9Y227 616 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 AAR2Q9Y312 384 aaKnown RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMX2Q9Y320 296 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 ASB1Q9Y576 335 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 PCDHB7Q9Y5E2 793 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 PCDHB14Q9Y5E9 798 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 V9GYH0 126 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 NUP98P52948 1817 aa5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 BAZ2BQ9UIF8 2168 aaKnown RBP5.45□□□□□ -1.54
VTI1BP4-201ENST00000427516 COL1A2P08123 1366 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 MYH9P35579 1960 aaKnown RBP5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 TRAV20A0A0B4J274 112 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRAMEF33A0A0G2JMD5 474 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAM95CA0A1B0GW59 222 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 RPS10-NUDT3A0A1W2PQS6 291 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 HYKKA2RU49 373 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 C7orf66A4D0T2 115 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 LRRC72A6NJI9 287 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 PDHXO00330 501 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC28A1O00337 649 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 CXCR6O00574 342 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 E2F3O00716 465 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 NRP1O14786 923 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 ADAMDEC1O15204 470 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 FABP7O15540 132 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 DHX15O43143 795 aaKnown RBP5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRAMEF10O60809 474 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 MMP20O60882 483 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 LILRB5O75023 590 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 ADAMTS4O75173 837 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 SCO1O75880 301 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 ANXA9O76027 345 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 METTL18O95568 372 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 DNTTP04053 509 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 SCG5P05408 212 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 CSF3P09919 207 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 H2AFB1P0C5Y9 115 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 H2AFB2P0C5Z0 115 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZDHHC11BP0C7U3 371 aa5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 HOXD8P13378 290 aaPredicted RBP5.44□□□□□ -1.54
VTI1BP4-201ENST00000427516 ANXA8P13928 327 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms