RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 GLMPQ8WWB7 406 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 C1orf54Q8WWF1 131 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 DNASE1L2Q92874 299 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 TCEAL3Q969E4 200 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 TMA16Q96EY4 203 aaKnown RBP5.42□□□□□ -1.54
C9orf3-205ENST00000427193 CAPZA3Q96KX2 299 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 NSMCE3Q96MG7 304 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 ZNF599Q96NL3 588 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 LGMNQ99538 433 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 WDR83Q9BRX9 315 aaKnown RBP5.42□□□□□ -1.54
C9orf3-205ENST00000427193 CARD6Q9BX69 1037 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 NACA2Q9H009 215 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 DDX47Q9H0S4 455 aaKnown RBP5.42□□□□□ -1.54
C9orf3-205ENST00000427193 MYLK2Q9H1R3 596 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 ECT2Q9H8V3 914 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 GOLGA6AQ9NYA3 693 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 DONSONQ9NYP3 566 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 SNX13Q9Y5W8 968 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 PTPRQQ9UMZ3 2332 aa5.42□□□□□ -1.54
C9orf3-205ENST00000427193 NUP205Q92621 2012 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 UBR5O95071 2799 aaPredicted RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 TICRRQ7Z2Z1 1910 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 TARSL2A2RTX5 802 aaKnown RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 CTAGE15A4D2H0 777 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 EFCAB8A8MWE9 144 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 VSTM5A8MXK1 200 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 J3KR12 359 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 RAD51CO43502 376 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 KDELR3O43731 214 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 TBL1XO60907 577 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 ZNF189O75820 626 aaPredicted RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 SLU7O95391 586 aaKnown RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 CTAGE8P0CG41 777 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 PTPN3P26045 913 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 CD70P32970 193 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 CETN2P41208 172 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 PAFAH1B1P43034 410 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 SSR1P43307 286 aaKnown RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 KCNJ1P48048 391 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 PAPOLAP51003 745 aaKnown RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 EIF3EP60228 445 aaKnown RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 TUBB4BP68371 445 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 ARF5P84085 180 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 ZBTB17Q13105 803 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 MSLNQ13421 630 aaPredicted RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 RUNX3Q13761 415 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 PTK6Q13882 451 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 DHX34Q14147 1143 aaKnown RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 DMC1Q14565 340 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 ELF2Q15723 593 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 ODF3L2Q3SX64 289 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 TEX44Q53QW1 395 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 INO80DQ53TQ3 878 aaPredicted RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 KCTD11Q693B1 232 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 MRNIPQ6NTE8 343 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 RWDD4Q6NW29 188 aaKnown RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 C1orf228Q6PIY5 440 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 CCDC137Q6PK04 289 aaKnown RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 CRTC1Q6UUV9 634 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 DHRS13Q6UX07 377 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 BZW1Q7L1Q6 419 aaKnown RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 CTAGE6Q86UF2 777 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 CCDC50Q8IVM0 306 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 CTAGE4Q8IX94 777 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 LAS2Q8IYD9 372 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 SPEM1Q8N4L4 309 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 IQCF1Q8N6M8 205 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 ZNF557Q8N988 423 aaPredicted RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 EIF1ADQ8N9N8 165 aaKnown RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 FAM47BQ8NA70 645 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 KDM1BQ8NB78 822 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 ARRDC2Q8TBH0 407 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 P3H4Q92791 437 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 ATP2A3Q93084 1043 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 MAGOHBQ96A72 148 aaKnown RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 MIB2Q96AX9 1013 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 PSKH2Q96QS6 385 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 VAT1Q99536 393 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 TMEM121Q9BTD3 319 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 CDCP1Q9H5V8 836 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 C10orf88Q9H8K7 445 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 ANKZF1Q9H8Y5 726 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 PCDH9Q9HC56 1237 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 GDF3Q9NR23 364 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 HEBP1Q9NRV9 189 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 ZDHHC18Q9NUE0 388 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 DUS2Q9NX74 493 aaKnown RBP5.41□□□□□ -1.54
C9orf3-205ENST00000427193 GRHL1Q9NZI5 618 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 AMACRQ9UHK6 382 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 HS3ST2Q9Y278 367 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 KNTC1P50748 2209 aa5.41□□□□□ -1.54
C9orf3-205ENST00000427193 MYOFQ9NZM1 2061 aa5.4□□□□□ -1.54
C9orf3-205ENST00000427193 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.4□□□□□ -1.54
C9orf3-205ENST00000427193 C10orf142B7Z368 130 aa5.4□□□□□ -1.54
C9orf3-205ENST00000427193 J3QKU1 62 aa5.4□□□□□ -1.54
C9orf3-205ENST00000427193 MCF2LO15068 1137 aa5.4□□□□□ -1.54
C9orf3-205ENST00000427193 TTI1O43156 1089 aa5.4□□□□□ -1.54
C9orf3-205ENST00000427193 TSPAN3O60637 253 aa5.4□□□□□ -1.54
C9orf3-205ENST00000427193 NFATC1O95644 943 aa5.4□□□□□ -1.54
C9orf3-205ENST00000427193 S100BP04271 92 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms