RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 MAN2B2Q9Y2E5 1009 aa25.5■■□□□ 1.67
LDB1-202ENST00000425280 ARPC2O15144 300 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 TGFB1P01137 390 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 HTR1BP28222 390 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 GRIA3P42263 894 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 RAB28P51157 221 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 C21orf58P58505 322 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 KRT33BQ14525 404 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 UGT8Q16880 541 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 VN1R5Q7Z5H4 357 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 SLCO4A1Q96BD0 722 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 TRIM15Q9C019 465 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 PAIP1Q9H074 479 aaKnown RBP25.49■■□□□ 1.67
LDB1-202ENST00000425280 MUC13Q9H3R2 512 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 PNMA8BQ9ULN7 279 aaPredicted RBP25.49■■□□□ 1.67
LDB1-202ENST00000425280 CROCCQ5TZA2 2017 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 ANXA4P09525 319 aaPredicted RBP25.49■■□□□ 1.67
LDB1-202ENST00000425280 PKLRP30613 574 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 TIA1P31483 386 aaKnown RBP eCLIP25.49■■□□□ 1.676e-24■□□□□ 9.8
LDB1-202ENST00000425280 MTAPQ13126 283 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 TRIP10Q15642 601 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 SWT1Q5T5J6 900 aaKnown RBP25.49■■□□□ 1.67
LDB1-202ENST00000425280 DNAJC14Q6Y2X3 702 aaPredicted RBP25.49■■□□□ 1.67
LDB1-202ENST00000425280 SYT13Q7L8C5 426 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 RD3Q7Z3Z2 195 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 LILRA2Q8N149 483 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 ABHD11Q8NFV4 315 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 OR7A2PQ8NGA2 310 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 KCNH6Q9H252 994 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 OR51B5Q9H339 312 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 RMND5AQ9H871 391 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 COPS7BQ9H9Q2 264 aaPredicted RBP25.49■■□□□ 1.67
LDB1-202ENST00000425280 NIPSNAP3AQ9UFN0 247 aaPredicted RBP25.49■■□□□ 1.67
LDB1-202ENST00000425280 RIMS3Q9UJD0 308 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 DUSP12Q9UNI6 340 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 CYP8B1Q9UNU6 501 aa25.49■■□□□ 1.67
LDB1-202ENST00000425280 TRBV5-3A0A0A0MS03 114 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 PRAMEF33A0A0G2JMD5 474 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 B3GALT4O96024 378 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 PEX2P28328 305 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 HTR1EP28566 365 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 OR4F3Q6IEY1 312 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 PTCRAQ6ISU1 281 aaPredicted RBP25.48■■□□□ 1.67
LDB1-202ENST00000425280 GALNT18Q6P9A2 607 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 ARMCX6Q7L4S7 300 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 GPR180Q86V85 440 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 SPPL2CQ8IUH8 684 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 TMEM145Q8NBT3 493 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 OR52E1Q8NGJ3 308 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 DNAJB8Q8NHS0 232 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 CDC26Q8NHZ8 85 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 ITCHQ96J02 903 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 PIF1Q9H611 641 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 SLC6A13Q9NSD5 602 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 SIRT5Q9NXA8 310 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 TBC1D29Q9UFV1 150 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 AP4S1Q9Y587 144 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 SNX13Q9Y5W8 968 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 CHURC1-FNTBB4DL54 471 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 IGHV4-34P06331 123 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 MTHFD1P11586 935 aaKnown RBP25.48■■□□□ 1.67
LDB1-202ENST00000425280 KIR3DL1P43629 444 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 PHEXP78562 749 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 FXNQ16595 210 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 DPY19L1Q2PZI1 675 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 LEXMQ3ZCV2 418 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 GTDC1Q4AE62 458 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 ANO7Q6IWH7 933 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 MSANTD1Q6ZTZ1 278 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 LPCAT2Q7L5N7 544 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 ANKRD46Q86W74 232 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 OR2L8Q8NGY9 312 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 PKP2Q99959 881 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 INPP5KQ9BT40 448 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 LMAN1LQ9HAT1 526 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 HS3ST3A1Q9Y663 406 aa25.48■■□□□ 1.67
LDB1-202ENST00000425280 A0A096LPI6 279 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 AQP12BA6NM10 295 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 TNFRSF10CO14798 259 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 ERN1O75460 977 aaKnown RBP25.47■■□□□ 1.67
LDB1-202ENST00000425280 AK4P27144 223 aaPredicted RBP25.47■■□□□ 1.67
LDB1-202ENST00000425280 SLC7A1P30825 629 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 ASMTP46597 345 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 CCR8P51685 355 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 OR4D2P58180 307 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 YPEL5P62699 121 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 RBBP5Q15291 538 aaKnown RBP25.47■■□□□ 1.67
LDB1-202ENST00000425280 TCEA2Q15560 299 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 LRRC36Q1X8D7 754 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 RUNDC3AQ59EK9 446 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 LRIF1Q5T3J3 769 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 COMMD6Q7Z4G1 85 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 AQP12AQ8IXF9 295 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 TOE1Q96GM8 510 aaKnown RBP25.47■■□□□ 1.67
LDB1-202ENST00000425280 ZNF184Q99676 751 aaPredicted RBP25.47■■□□□ 1.67
LDB1-202ENST00000425280 AIF1LQ9BQI0 150 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 RAB11FIP5Q9BXF6 653 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 ICKQ9UPZ9 632 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 PCDHB14Q9Y5E9 798 aa25.47■■□□□ 1.67
LDB1-202ENST00000425280 SAP18O00422 153 aaKnown RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms