RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 H3BMM5 538 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 HAT1O14929 419 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 PRPF4O43172 522 aaKnown RBP eCLIP14.17□□□□□ -0.141e-6■■■■■ 30.8
ATG4B-209ENST00000425239 PRAMEF2O60811 474 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 AVILO75366 819 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 VPS26AO75436 327 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 RASAL1O95294 804 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 ERVK-10P10266 1014 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 ICAM2P13598 275 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 PKMP14618 531 aaKnown RBP14.17□□□□□ -0.14
ATG4B-209ENST00000425239 CHRM3P20309 590 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 RPA3P35244 121 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-209ENST00000425239 HSD17B2P37059 387 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 SKIV2L2P42285 1042 aaKnown RBP14.17□□□□□ -0.14
ATG4B-209ENST00000425239 ADORA2A-AS1P86434 159 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 SEL1L2Q5TEA6 688 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 KIAA0930Q6ICG6 404 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-209ENST00000425239 MRNIPQ6NTE8 343 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 ZNF549Q6P9A3 640 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 TMEM207Q6UWW9 146 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 BNC2Q6ZN30 1099 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-209ENST00000425239 NEK10Q6ZWH5 1172 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 PRSS41Q7RTY9 318 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 MRGPRGQ86SM5 289 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 SDCCAG8Q86SQ7 713 aaPredicted RBP14.17□□□□□ -0.14
ATG4B-209ENST00000425239 CILP2Q8IUL8 1156 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 ZNF295-AS1Q8N0V1 137 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 TM4SF19Q96DZ7 209 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 YIPF2Q9BWQ6 316 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 VN1R1Q9GZP7 353 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.17□□□□□ -0.141e-8■□□□□ 10
ATG4B-209ENST00000425239 SEC14L3Q9UDX4 400 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 ZNF835Q9Y2P0 537 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 PCDHGB6Q9Y5F9 930 aa14.17□□□□□ -0.14
ATG4B-209ENST00000425239 TRGV8A0A0C4DH27 118 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 H0YIG0 161 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 AP3B1O00203 1094 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 CCL21O00585 134 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 CRYABP02511 175 aaKnown RBP14.16□□□□□ -0.14
ATG4B-209ENST00000425239 F7P08709 466 aaPredicted RBP14.16□□□□□ -0.14
ATG4B-209ENST00000425239 C8orf89P0DMQ9 161 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 TPSB2P20231 275 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 OGNP20774 298 aaKnown RBP14.16□□□□□ -0.14
ATG4B-209ENST00000425239 MAGEA6P43360 314 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 KCNJ1P48048 391 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 ABATP80404 500 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 PMP22Q01453 160 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 TPSAB1Q15661 275 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 RNF187Q5TA31 235 aaPredicted RBP14.16□□□□□ -0.14
ATG4B-209ENST00000425239 PLAG1Q6DJT9 500 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 C4orf22Q6V702 233 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 LANCL3Q6ZV70 420 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 PCGF5Q86SE9 256 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 CAND1Q86VP6 1230 aaKnown RBP14.16□□□□□ -0.14
ATG4B-209ENST00000425239 ZNF808Q8N4W9 903 aaPredicted RBP14.16□□□□□ -0.14
ATG4B-209ENST00000425239 MDS2Q8NDY4 140 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 OR9A4Q8NGU2 314 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 TRIM8Q9BZR9 551 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 KLHL42Q9P2K6 505 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 PCYOX1Q9UHG3 505 aa14.16□□□□□ -0.14
ATG4B-209ENST00000425239 SCN3AQ9NY46 2000 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 F8P00451 2351 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 H7BY64 318 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 TXNDC9O14530 226 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 MAN1A2O60476 641 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 NSA2O95478 260 aaKnown RBP14.15□□□□□ -0.14
ATG4B-209ENST00000425239 CYC1P08574 325 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 HTR1EP28566 365 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 IMPA1P29218 277 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 BASP1P80723 227 aaKnown RBP14.15□□□□□ -0.14
ATG4B-209ENST00000425239 CDK16Q00536 496 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 TIAL1Q01085 375 aaKnown RBP eCLIP14.15□□□□□ -0.144e-6■■□□□ 12.4
ATG4B-209ENST00000425239 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.15□□□□□ -0.14
ATG4B-209ENST00000425239 ABHD17BQ5VST6 288 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 TMEM214Q6NUQ4 689 aaKnown RBP14.15□□□□□ -0.14
ATG4B-209ENST00000425239 NEPROQ6NW34 567 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 CPEB2Q7Z5Q1 589 aaKnown RBP14.15□□□□□ -0.14
ATG4B-209ENST00000425239 CHERPQ8IWX8 916 aaKnown RBP14.15□□□□□ -0.14
ATG4B-209ENST00000425239 PRELID2Q8N945 189 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 CCDC138Q96M89 665 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 PRAP1Q96NZ9 151 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 SIGLEC12Q96PQ1 595 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 PHF12Q96QT6 1004 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 MACROD1Q9BQ69 325 aa14.15□□□□□ -0.14
ATG4B-209ENST00000425239 ZNF469Q96JG9 3925 aaPredicted RBP14.14□□□□□ -0.15
ATG4B-209ENST00000425239 ZCWPW2A0A1B0GU75 182 aa14.14□□□□□ -0.15
ATG4B-209ENST00000425239 ASPDHA6ND91 283 aa14.14□□□□□ -0.15
ATG4B-209ENST00000425239 C19orf84I3L1E1 186 aa14.14□□□□□ -0.15
ATG4B-209ENST00000425239 SMAPO00193 183 aa14.14□□□□□ -0.15
ATG4B-209ENST00000425239 LCMT2O60294 686 aaKnown RBP14.14□□□□□ -0.15
ATG4B-209ENST00000425239 SEC24DO94855 1032 aaPredicted RBP14.14□□□□□ -0.15
ATG4B-209ENST00000425239 STATHP02808 62 aa14.14□□□□□ -0.15
ATG4B-209ENST00000425239 CATP04040 527 aaKnown RBP14.14□□□□□ -0.15
ATG4B-209ENST00000425239 ANXA5P08758 320 aa14.14□□□□□ -0.15
ATG4B-209ENST00000425239 MPC1LP0DKB6 136 aa14.14□□□□□ -0.15
ATG4B-209ENST00000425239 PTGER4P35408 488 aa14.14□□□□□ -0.15
ATG4B-209ENST00000425239 CD96P40200 585 aa14.14□□□□□ -0.15
ATG4B-209ENST00000425239 BCL6P41182 706 aa14.14□□□□□ -0.15
ATG4B-209ENST00000425239 ZNF33BQ06732 778 aa14.14□□□□□ -0.15
ATG4B-209ENST00000425239 TUBA3CQ13748 450 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms