RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 PROX2Q3B8N5 592 aa13.73□□□□□ -0.21
TPM3P9-201ENST00000424846 LRRC66Q68CR7 880 aa13.73□□□□□ -0.21
TPM3P9-201ENST00000424846 EIF3MQ7L2H7 374 aaKnown RBP13.73□□□□□ -0.21
TPM3P9-201ENST00000424846 SYT12Q8IV01 421 aa13.73□□□□□ -0.21
TPM3P9-201ENST00000424846 ADAMTS19Q8TE59 1207 aa13.73□□□□□ -0.21
TPM3P9-201ENST00000424846 SLC38A4Q969I6 547 aa13.73□□□□□ -0.21
TPM3P9-201ENST00000424846 TBC1D20Q96BZ9 403 aa13.73□□□□□ -0.21
TPM3P9-201ENST00000424846 CMTM7Q96FZ5 175 aa13.73□□□□□ -0.21
TPM3P9-201ENST00000424846 PITX2Q99697 317 aa13.73□□□□□ -0.21
TPM3P9-201ENST00000424846 BCL7BQ9BQE9 202 aa13.73□□□□□ -0.21
TPM3P9-201ENST00000424846 HTATIP2Q9BUP3 242 aa13.73□□□□□ -0.21
TPM3P9-201ENST00000424846 GPR83Q9NYM4 423 aa13.73□□□□□ -0.21
TPM3P9-201ENST00000424846 ERVW-1Q9UQF0 538 aa13.73□□□□□ -0.21
TPM3P9-201ENST00000424846 MAGEB17A8MXT2 336 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 UPK1BO75841 260 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 ALOX5P09917 674 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 OR1E2P47887 323 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 SMAD3P84022 425 aaKnown RBP13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 MTAPQ13126 283 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 GPNMBQ14956 572 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 DGKKQ5KSL6 1271 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 UBE2UQ5VVX9 321 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 CRTC1Q6UUV9 634 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 TPGS1Q6ZTW0 290 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 SVOPQ8N4V2 548 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 POC5Q8NA72 575 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 DBF4BQ8NFT6 615 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 FEVQ99581 238 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 CDADC1Q9BWV3 514 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 ITPAQ9BY32 194 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 TMEM161AQ9NX61 479 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 PRAMEF25A6NGN4 478 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 E9PQ18 207 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 GFRA2O00451 464 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 RFPL2O75678 378 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 EPN2O95208 641 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 STSP08842 583 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 COX7A2P14406 83 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 LHCGRP22888 699 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 SPAM1P38567 509 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 NR4A2P43354 598 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 PPP3CCP48454 512 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 STK19P49842 368 aaPredicted RBP13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 ITGA1P56199 1179 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 CHIT1Q13231 466 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 ZNF404Q494X3 552 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 FRG2Q64ET8 278 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 ZNF852Q6ZMS4 543 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 NLGN4XQ8N0W4 816 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 Q96MT0 163 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 FRG2BQ96QU4 278 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 CENPOQ9BU64 300 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 VN1R3Q9BXE9 311 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 TPT1P8Q9HAU6 139 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 SNX6Q9UNH7 406 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 AP3M1Q9Y2T2 418 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 HSPE1-MOB4S4R3N1 261 aa13.72□□□□□ -0.21
TPM3P9-201ENST00000424846 CCDC88CQ9P219 2028 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 MYOFQ9NZM1 2061 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 CLDN24A6NM45 220 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 TLL1O43897 1013 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 PCDH7O60245 1069 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 GRK3P35626 688 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 CTSOP43234 321 aaPredicted RBP13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 SLC6A12P48065 614 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 FADDQ13158 208 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 CDH18Q13634 790 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 TIGD6Q17RP2 521 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 ATAD3BQ5T9A4 648 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 CLIP4Q8N3C7 705 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 CHCHD4Q8N4Q1 142 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 GGHQ92820 318 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 TMEM121BQ9BXQ6 578 aaPredicted RBP13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 KCTD5Q9NXV2 234 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 AGAP5A6NIR3 686 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 PTHP01270 115 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 IDH2P48735 452 aaKnown RBP13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 BCL2A1Q16548 175 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 PLEKHG6Q3KR16 790 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 ZNF648Q5T619 568 aaPredicted RBP13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 LINC00299Q6ZSB3 139 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 SYTL1Q8IYJ3 562 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 SLC5A8Q8N695 610 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 LMNTD1Q8N9Z9 388 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 STARD8Q92502 1023 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 HRASLS5Q96KN8 279 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 NIPSNAP1Q9BPW8 284 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 TRPM5Q9NZQ8 1165 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 FZD4Q9ULV1 537 aa13.71□□□□□ -0.21
TPM3P9-201ENST00000424846 NINQ8N4C6 2090 aa13.71□□□□□ -0.22
TPM3P9-201ENST00000424846 GREM1O60565 184 aa13.7□□□□□ -0.22
TPM3P9-201ENST00000424846 DLGAP3O95886 979 aa13.7□□□□□ -0.22
TPM3P9-201ENST00000424846 C9P02748 559 aa13.7□□□□□ -0.22
TPM3P9-201ENST00000424846 ABCB1P08183 1280 aaPredicted RBP13.7□□□□□ -0.22
TPM3P9-201ENST00000424846 ACLYP53396 1101 aa13.7□□□□□ -0.22
TPM3P9-201ENST00000424846 AP1S1P61966 158 aa13.7□□□□□ -0.22
TPM3P9-201ENST00000424846 CCSMST1Q4G0I0 132 aa13.7□□□□□ -0.22
TPM3P9-201ENST00000424846 TMEM150AQ86TG1 271 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms