RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 PARP9Q8IXQ6 854 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 CD200R1Q8TD46 325 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 MIPEPQ99797 713 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 SELENOSQ9BQE4 189 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 LRRC1Q9BTT6 524 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 ILKAPQ9H0C8 392 aaPredicted RBP12.36□□□□□ -0.43
VRK3-203ENST00000424804 PLAC1Q9HBJ0 212 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 FAM114A2Q9NRY5 505 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 TAS2R13Q9NYV9 303 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 GRHL1Q9NZI5 618 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 MAP10Q9P2G4 905 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 SLC5A6Q9Y289 635 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 MED16Q9Y2X0 877 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 DHRS7Q9Y394 339 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 MAU2Q9Y6X3 613 aa12.36□□□□□ -0.43
VRK3-203ENST00000424804 HYKKA2RU49 373 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 KLHL41O60662 606 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 PIAS1O75925 651 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 MPC1LP0DKB6 136 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 PIM1P11309 404 aaPredicted RBP12.35□□□□□ -0.43
VRK3-203ENST00000424804 GABRB3P28472 473 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 SSTR1P30872 391 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 TSFMP43897 325 aaKnown RBP12.35□□□□□ -0.43
VRK3-203ENST00000424804 RGS4P49798 205 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 CDKN2DP55273 166 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 KLC1Q07866 573 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 STEAP4Q687X5 459 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 ZNF324BQ6AW86 544 aaPredicted RBP12.35□□□□□ -0.43
VRK3-203ENST00000424804 SUSD1Q6UWL2 747 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 KIAA0408Q6ZU52 694 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 UBE2R2Q712K3 238 aaPredicted RBP12.35□□□□□ -0.43
VRK3-203ENST00000424804 STRA8Q7Z7C7 330 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 CNTN4Q8IWV2 1026 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 SHISA5Q8N114 240 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 MYO1HQ8N1T3 1032 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 PPFIBP2Q8ND30 876 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 ST6GALNAC3Q8NDV1 305 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 CATSPER1Q8NEC5 780 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 OR9A1PQ8NGU1 263 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 STT3BQ8TCJ2 826 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 EEF1AKMT1Q8WVE0 214 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 LINGO1Q96FE5 620 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 PKP4Q99569 1192 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 LHPPQ9H008 270 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 SEMA3GQ9NS98 782 aa12.35□□□□□ -0.43
VRK3-203ENST00000424804 INTS7Q9NVH2 962 aaKnown RBP12.35□□□□□ -0.43
VRK3-203ENST00000424804 ABCA12Q86UK0 2595 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 MYO7BQ6PIF6 2116 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 CPAMD8Q8IZJ3 1885 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 A0A0J9YVX5 310 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 A0A1W2PQ72 361 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 PABPN1LA6NDY0 278 aaKnown RBP12.34□□□□□ -0.43
VRK3-203ENST00000424804 E7ESA3 106 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 ZBTB14O43829 449 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 PSIP1O75475 530 aaKnown RBP12.34□□□□□ -0.43
VRK3-203ENST00000424804 ZGLP1P0C6A0 271 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 ENO3P13929 434 aaPredicted RBP12.34□□□□□ -0.43
VRK3-203ENST00000424804 RPA3P35244 121 aaPredicted RBP12.34□□□□□ -0.43
VRK3-203ENST00000424804 GUCY2DQ02846 1103 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 CAV1Q03135 178 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 FAM214AQ32MH5 1076 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 TUBB8Q3ZCM7 444 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 VWA2Q5GFL6 755 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 THEMIS2Q5TEJ8 643 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 HECTD2Q5U5R9 776 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 AGAP7PQ5VUJ5 663 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 PAQR3Q6TCH7 311 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 ZNF572Q7Z3I7 529 aaPredicted RBP12.34□□□□□ -0.43
VRK3-203ENST00000424804 PAQR7Q86WK9 346 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 TTC29Q8NA56 475 aaPredicted RBP12.34□□□□□ -0.43
VRK3-203ENST00000424804 DNAJB14Q8TBM8 379 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 FBXO25Q8TCJ0 367 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 GRHL3Q8TE85 626 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 TM9SF4Q92544 642 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 ALKBH8Q96BT7 664 aaKnown RBP12.34□□□□□ -0.43
VRK3-203ENST00000424804 C8orf44Q96CB5 159 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 AGAP4Q96P64 663 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 ZNF304Q9HCX3 659 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 SPATA7Q9P0W8 599 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 TXNDC16Q9P2K2 825 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 NXT1Q9UKK6 140 aaKnown RBP12.34□□□□□ -0.43
VRK3-203ENST00000424804 PSAT1Q9Y617 370 aa12.34□□□□□ -0.43
VRK3-203ENST00000424804 CTAGE15A4D2H0 777 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 H0YGG7 62 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 KIF2AO00139 706 aaPredicted RBP12.33□□□□□ -0.44
VRK3-203ENST00000424804 MYO1CO00159 1063 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 FOXS1O43638 330 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 HPP00738 406 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 CTAGE8P0CG41 777 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 COX6A1P12074 109 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 SOX11P35716 441 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 SKIV2L2P42285 1042 aaKnown RBP12.33□□□□□ -0.44
VRK3-203ENST00000424804 PNLIPRP1P54315 467 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 EMP3P54852 163 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 ARF3P61204 181 aaPredicted RBP12.33□□□□□ -0.44
VRK3-203ENST00000424804 RBBP7Q16576 425 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 ZNF425Q6IV72 752 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 FAM45BPQ6NSW5 357 aa12.33□□□□□ -0.44
VRK3-203ENST00000424804 RPUSD3Q6P087 351 aaKnown RBP12.33□□□□□ -0.44
VRK3-203ENST00000424804 CYHR1Q6ZMK1 362 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms