RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PRDX6P30041 224 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 NMT1P30419 496 aaKnown RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 RRM2P31350 389 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 CA8P35219 290 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 MAGEB1P43366 347 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 NSFP46459 744 aaKnown RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 RGS7P49802 495 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 GMPSP49915 693 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 VAV2P52735 878 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 YWHAEP62258 255 aaKnown RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 IRX1P78414 480 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 TXNL4AP83876 142 aaKnown RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 DR1Q01658 176 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 MC2RQ01718 297 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 BNC1Q01954 994 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 PMPCAQ10713 525 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 DNASE1L3Q13609 305 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 CYLC2Q14093 348 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 MVPQ14764 893 aaKnown RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 STK38Q15208 465 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 ANGPT1Q15389 498 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 CARTPTQ16568 116 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 TATDN3Q17R31 274 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 TCTN1Q2MV58 587 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 POM121L1PQ3SYA9 428 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 FAM98BQ52LJ0 330 aaKnown RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 PDLIM3Q53GG5 364 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 C6orf10Q5SRN2 563 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF618Q5T7W0 954 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 WLSQ5T9L3 541 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 PRAMEF5Q5TYX0 476 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 DCAF12L2Q5VW00 463 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 PRAMEF6Q5VXH4 476 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 LRRC66Q68CR7 880 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 ATL3Q6DD88 541 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 CLEC6AQ6EIG7 209 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 FBXO46Q6PJ61 603 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 TMEM26Q6ZUK4 368 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 SLC16A9Q7RTY1 509 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 GRAMD2AQ8IUY3 354 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 ZDHHC23Q8IYP9 409 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 C17orf47Q8NEP4 570 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 TRPV3Q8NET8 790 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 TRMT10AQ8TBZ6 339 aaKnown RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 LKAAEAR1Q8TD35 194 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 TAS1R2Q8TE23 839 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 WIPF2Q8TF74 440 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 CCDC12Q8WUD4 166 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 ASZ1Q8WWH4 475 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 SNX19Q92543 992 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 APOLD1Q96LR9 279 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 FYTTD1Q96QD9 318 aaKnown RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 SIN3AQ96ST3 1273 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 CYTH2Q99418 400 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 ELOVL1Q9BW60 279 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 CINPQ9BW66 212 aaPredicted RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 SPATA16Q9BXB7 569 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 C1QTNF5Q9BXJ0 243 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 MRPL13Q9BYD1 178 aaKnown RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 SIRPDQ9H106 197 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 RGCCQ9H4X1 137 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 LRRC19Q9H756 370 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 MVB12BQ9H7P6 319 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 MEAF6Q9HAF1 191 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 LY9Q9HBG7 655 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 BPIFA1Q9NP55 256 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 RNF14Q9UBS8 474 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 CHRNA9Q9UGM1 479 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 NIP7Q9Y221 180 aaKnown RBP eCLIP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 PRELID1Q9Y255 219 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 DTX4Q9Y2E6 619 aa3.55□□□□□ -1.84
SF3B1-205ENST00000424674 BZW2Q9Y6E2 419 aaKnown RBP3.55□□□□□ -1.84
SF3B1-205ENST00000424674 A0A0U1RQV5 110 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 A0A1W2PPW3 197 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ARHGEF35A5YM69 484 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 NEMP2A6NFY4 417 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 WASH3PC4AMC7 463 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 MAP2K7O14733 419 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 DSCR3O14972 297 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 FLRT2O43155 660 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 GRID2O43424 1007 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 CREG1O75629 220 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 STBD1O95210 358 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 SNAI1O95863 264 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 CAPN1P07384 714 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 PLEKP08567 350 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 DANCRP0C864 163 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 STAG3L2P0CL84 134 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 UMPSP11172 480 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 DBTP11182 482 aaKnown RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ZNF44P15621 663 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ITGAXP20702 1163 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 PTNP21246 168 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ELAVL4P26378 380 aaKnown RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 TYK2P29597 1187 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 SLC8A1P32418 973 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ADRA1AP35348 466 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 ATP5C1P36542 298 aaKnown RBP3.54□□□□□ -1.84
SF3B1-205ENST00000424674 DLSTP36957 453 aa3.54□□□□□ -1.84
SF3B1-205ENST00000424674 GRIA1P42261 906 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms