RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 DUX1O43812 170 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 RAMP2O60895 175 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 TJP3O95049 919 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 SPDEFO95238 335 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 SMC2O95347 1197 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 IGSF6O95976 241 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 IL6RP08887 468 aaPredicted RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 CCNB1P14635 433 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 KELP23276 732 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 TEAD1P28347 426 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 OAS2P29728 719 aaKnown RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 THBS4P35443 961 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 LIPAP38571 399 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 CSNK1DP48730 415 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 SELENOPP49908 381 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 MAZP56270 477 aaKnown RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 OR1D5P58170 312 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 YBEYP58557 167 aaPredicted RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 RPL15P61313 204 aaKnown RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 RAD51Q06609 339 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 ABHD18Q0P651 414 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 CDC20Q12834 499 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 RALGDSQ12967 914 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 PRKG2Q13237 762 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 STIM1Q13586 685 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 DNASE1L3Q13609 305 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 CYTH1Q15438 398 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 CYP1B1Q16678 543 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 LACTB2Q53H82 288 aaPredicted RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 FAM72AQ5TYM5 149 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 CAPRIN2Q6IMN6 1127 aaKnown RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 FAM72DQ6L9T8 149 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 VWA1Q6PCB0 445 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 BRAT1Q6PJG6 821 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 C16orf89Q6UX73 402 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 TIPARPQ7Z3E1 657 aaKnown RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 RD3Q7Z3Z2 195 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 ARHGAP22Q7Z5H3 698 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 TAF8Q7Z7C8 310 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 SLC47A2Q86VL8 602 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 FAM72BQ86X60 149 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 FAM131BQ86XD5 332 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 TICAM1Q8IUC6 712 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 PELI3Q8N2H9 469 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 RYBPQ8N488 228 aaPredicted RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 FAM71DQ8N9W8 422 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 TMEM35BQ8NCS4 154 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 CPEB3Q8NE35 698 aaKnown RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 CCDC112Q8NEF3 446 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 CCL4L1Q8NHW4 92 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 ART4Q93070 314 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 SMARCE1Q969G3 411 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 ECHDC3Q96DC8 303 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 RTP4Q96DX8 246 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 FAR2Q96K12 515 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 TIGD1Q96MW7 591 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 ZNF641Q96N77 438 aaPredicted RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 TEFMQ96QE5 360 aaKnown RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 CHCHD6Q9BRQ6 235 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 FUZQ9BT04 418 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 EFHD1Q9BUP0 239 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 FRMD8Q9BZ67 464 aaPredicted RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 ZNF703Q9H7S9 590 aaPredicted RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 PDFQ9HBH1 243 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 RDH14Q9HBH5 336 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 SIX2Q9NPC8 291 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 MRPL40Q9NQ50 206 aaKnown RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 ZNF71Q9NQZ8 489 aaPredicted RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 SPATS2LQ9NUQ6 558 aaKnown RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 TRNAU1APQ9NX07 287 aaKnown RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 AASSQ9UDR5 926 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 OR12D3Q9UGF7 316 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 MAN1B1Q9UKM7 699 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 HSF4Q9ULV5 492 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 HPCAL4Q9UM19 191 aa4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 TMEM184BQ9Y519 407 aaPredicted RBP4.55□□□□□ -1.68
CDC42EP3-202ENST00000422687 ZFC3H1O60293 1989 aaKnown RBP4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 CSMD2Q7Z408 3487 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 BICDL2A1A5D9 508 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 A6NCN8 305 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 PGPEP1LA6NFU8 196 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 WIPF3A6NGB9 483 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 B4DGG1 531 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 K7EM74 188 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 CACNB4O00305 520 aaPredicted RBP4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 ZW10O43264 779 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 BUB1O43683 1085 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 PMPCBO75439 489 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 RECQL5O94762 991 aaPredicted RBP4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 NDUFA10O95299 355 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 PIGNO95427 931 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 LSM8O95777 96 aaKnown RBP4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 ONECUT2O95948 504 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 PCCBP05166 539 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 IVLP07476 585 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 PLEKP08567 350 aaPredicted RBP4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 RNF224P0DH78 156 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 MMP8P22894 467 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 ADRA1DP25100 572 aa4.54□□□□□ -1.68
CDC42EP3-202ENST00000422687 PON1P27169 355 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms