RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CHRNA1P02708 482 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 EPCAMP16422 314 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 CDH11P55287 796 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 S100A12P80511 92 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 CDK6Q00534 326 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 CCBE1Q6UXH8 406 aaPredicted RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 RBM18Q96H35 190 aaKnown RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 CD93Q9NPY3 652 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 FARSAQ9Y285 508 aaKnown RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 PCDHA2Q9Y5H9 948 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 MEN1O00255 615 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 ZNF208O43345 1280 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 GDI2P50395 445 aaKnown RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 SLC25A11Q02978 314 aaKnown RBP12.03□□□□□ -0.48
CLCN4-203ENST00000421085 KCNAB2Q13303 367 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 NPY5RQ15761 445 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 SIRPB2Q5JXA9 342 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 SNAP47Q5SQN1 464 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 C6orf141Q5SZD1 244 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 UBXN11Q5T124 520 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 ALKBH2Q6NS38 261 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 KCTD9Q7L273 389 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 GOLGA7Q7Z5G4 137 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 OR2L8Q8NGY9 312 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 SLC16A10Q8TF71 515 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 ACBD6Q9BR61 282 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 TAPBPLQ9BX59 468 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 SMURF1Q9HCE7 757 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 TAS2R10Q9NYW0 307 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 SEC14L4Q9UDX3 406 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 FBXL3Q9UKT7 428 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 RIPK3Q9Y572 518 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 CLCA3PQ9Y6N3 262 aa12.03□□□□□ -0.48
CLCN4-203ENST00000421085 NID2Q14112 1375 aa12.02□□□□□ -0.48
CLCN4-203ENST00000421085 A0A0G2JN53 185 aa12.02□□□□□ -0.48
CLCN4-203ENST00000421085 CD97P48960 835 aa12.02□□□□□ -0.48
CLCN4-203ENST00000421085 SEMG2Q02383 582 aa12.02□□□□□ -0.48
CLCN4-203ENST00000421085 ATXN7L3Q14CW9 347 aaPredicted RBP12.02□□□□□ -0.48
CLCN4-203ENST00000421085 SPANXN4Q5MJ08 99 aa12.02□□□□□ -0.48
CLCN4-203ENST00000421085 ATAT1Q5SQI0 421 aa12.02□□□□□ -0.48
CLCN4-203ENST00000421085 SYPL2Q5VXT5 272 aa12.02□□□□□ -0.48
CLCN4-203ENST00000421085 CHST9Q7L1S5 443 aa12.02□□□□□ -0.48
CLCN4-203ENST00000421085 POGLUT1Q8NBL1 392 aa12.02□□□□□ -0.48
CLCN4-203ENST00000421085 ADAD1Q96M93 576 aaKnown RBP12.02□□□□□ -0.48
CLCN4-203ENST00000421085 TRMT61BQ9BVS5 477 aaKnown RBP12.02□□□□□ -0.48
CLCN4-203ENST00000421085 COL20A1Q9P218 1284 aa12.02□□□□□ -0.48
CLCN4-203ENST00000421085 FAM170BA6NMN3 283 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 HAS3O00219 553 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 C1QTNF8P60827 252 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 CHERPQ8IWX8 916 aaKnown RBP12.02□□□□□ -0.49
CLCN4-203ENST00000421085 SLC7A6OSQ96CW6 309 aaPredicted RBP12.02□□□□□ -0.49
CLCN4-203ENST00000421085 MTFR1LQ9H019 292 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 RHCGQ9UBD6 479 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 PLEKHA6Q9Y2H5 1048 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 PCDHGB6Q9Y5F9 930 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 CLDN4O14493 209 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 ADAMTS3O15072 1205 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 PMM2O15305 246 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 DENRO43583 198 aaKnown RBP12.02□□□□□ -0.49
CLCN4-203ENST00000421085 RFPL2O75678 378 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 VNN2O95498 520 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 NPPAP01160 153 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 ZNF20P17024 532 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 ABHD18Q0P651 414 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 ST3GAL4Q11206 333 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 CDKL4Q5MAI5 379 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 TCEAL6Q6IPX3 200 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 HDDC3Q8N4P3 179 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 C1orf52Q8N6N3 182 aaKnown RBP12.02□□□□□ -0.49
CLCN4-203ENST00000421085 PROKR2Q8NFJ6 384 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 RDH12Q96NR8 316 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 TM9SF2Q99805 663 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 SLC32A1Q9H598 525 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 EXTL2Q9UBQ6 330 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 SLC19A2O60779 497 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 RFPL1O75677 317 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 ADH1CP00326 375 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 RGS19P49795 217 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 PCBP2Q15366 365 aaKnown RBP eCLIP12.02□□□□□ -0.491e-10■■■■□ 20.2
CLCN4-203ENST00000421085 PIGGQ5H8A4 983 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 FRG2Q64ET8 278 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 PLD6Q8N2A8 252 aaKnown RBP12.02□□□□□ -0.49
CLCN4-203ENST00000421085 OR2AJ1Q8NGZ0 328 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 S100A16Q96FQ6 103 aaKnown RBP12.02□□□□□ -0.49
CLCN4-203ENST00000421085 FRG2BQ96QU4 278 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 SRCP12931 536 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 PSMD8P48556 350 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 GPR142Q7Z601 462 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 TCEANCQ8N8B7 351 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 YIPF7Q8N8F6 280 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 LGALS12Q96DT0 336 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 SCGB3A2Q96PL1 93 aa12.02□□□□□ -0.49
CLCN4-203ENST00000421085 SNAPC5O75971 98 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 POP4O95707 220 aaKnown RBP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 SRPRAP08240 638 aaKnown RBP12.01□□□□□ -0.49
CLCN4-203ENST00000421085 ALAS2P22557 587 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 OGDHQ02218 1023 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 NDUFA9Q16795 377 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 SLC10A6Q3KNW5 377 aa12.01□□□□□ -0.49
CLCN4-203ENST00000421085 ZNF367Q7RTV3 350 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms