RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 CCDC149Q6ZUS6 474 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 B3GNT8Q7Z7M8 397 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 FAM217AQ8IXS0 508 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ECHDC3Q96DC8 303 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CSF3RQ99062 836 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZNF556Q9HAH1 456 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ERVW-1Q9UQF0 538 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PCDHGB3Q9Y5G1 929 aa11.32□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 KCNE1BA0A087WTH5 132 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ATG13O75143 517 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 C8AP07357 584 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ACPPP15309 386 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GPX2P18283 190 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GZMMP51124 257 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GP2P55259 537 aaKnown RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CXCR4P61073 352 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TEAD4Q15561 434 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 POM121L1PQ3SYA9 428 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZZZ3Q8IYH5 903 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 OR8J2Q8NGG1 315 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 OR4A15Q8NGL6 344 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TANKQ92844 425 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 REPS1Q96D71 796 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 DEFB118Q96PH6 123 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 YME1L1Q96TA2 773 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 RIOK2Q9BVS4 552 aaKnown RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 RAD18Q9NS91 495 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 RAPGEFL1Q9UHV5 662 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PAIP2BQ9ULR5 123 aaKnown RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 IGLV3-16A0A075B6K0 115 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TRIM64BA6NI03 449 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 AP2A2O94973 939 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MT-ND2P03891 347 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 POLR2EP19388 210 aaKnown RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 WEE1P30291 646 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PFN3P60673 137 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MTAPQ13126 283 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 VEZF1Q14119 521 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SF1Q15637 639 aaKnown RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 KDM4DQ6B0I6 523 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GPR153Q6NV75 609 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CBLL1Q75N03 491 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TMPRSS11BQ86T26 416 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 IGFN1Q86VF2 1251 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 FAR1Q8WVX9 515 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 FAM210AQ96ND0 272 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 BARD1Q99728 777 aaKnown RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HEPHQ9BQS7 1158 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ATAD3AQ9NVI7 634 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PAK1IP1Q9NWT1 392 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 FAM32AQ9Y421 112 aaKnown RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 BOLA2-SMG1P6H3BVE0 249 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GFRA2O00451 464 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 JRKO75564 520 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PTPN6P29350 595 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 VIPR1P32241 457 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ETV3P41162 512 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 IDH2P48735 452 aaKnown RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 VBP1P61758 197 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 RPP38P78345 283 aaKnown RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CREMQ03060 361 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 NPRL3Q12980 569 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CAMK2GQ13555 558 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CLCA4Q14CN2 919 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HIST2H2ACQ16777 129 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HIST2H2AA3Q6FI13 130 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 NEK10Q6ZWH5 1172 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 DDX53Q86TM3 631 aaKnown RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 NPAS3Q8IXF0 933 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 IPCEF1Q8WWN9 437 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZNF566Q969W8 418 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZHX1-C8orf76Q96EF9 292 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SH3YL1Q96HL8 342 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 BCL7BQ9BQE9 202 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZSCAN5AQ9BUG6 496 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 NECTIN3Q9NQS3 549 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 IMPAD1Q9NX62 359 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CORINQ9Y5Q5 1042 aa11.31□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TANC1Q9C0D5 1861 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 FUOMA2VDF0 154 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 M0QX08 132 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GNRH1P01148 92 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GSTM1P09488 218 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 INHBBP09529 407 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PREPP48147 710 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GSTM4Q03013 218 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 AQP6Q13520 282 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 STARD3Q14849 445 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZNF648Q5T619 568 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CAPN13Q6MZZ7 669 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TMEM25Q86YD3 366 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZNF557Q8N988 423 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CHPT1Q8WUD6 406 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 DACH2Q96NX9 599 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TRNAU1APQ9NX07 287 aaKnown RBP11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZNF282Q9UDV7 671 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MBD1Q9UIS9 605 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 B3GNT3Q9Y2A9 372 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 DYRK1BQ9Y463 629 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms