RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 CATSPERZQ9NTU4 200 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 NDFIP2Q9NV92 336 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 RPS6KA6Q9UK32 745 aa7.77□□□□□ -1.16
HMGXB4-202ENST00000418170 CIB4A0PJX0 185 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 FABP12A6NFH5 140 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 A8MUA0 341 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 FGF10O15520 208 aaPredicted RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 TSC22D2O75157 780 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 TNFRSF21O75509 655 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 RFPL3O75679 317 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 ESR1P03372 595 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 USP17L7P0C7H9 530 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 TXNP10599 105 aaKnown RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 MAP2K3P46734 347 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 IDH2P48735 452 aaKnown RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 RABGGTBP53611 331 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 RAB25P57735 213 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 B2MP61769 119 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 MAD2L1Q13257 205 aaPredicted RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 LARS2Q15031 903 aaKnown RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 GRIK4Q16099 956 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 HKDC1Q2TB90 917 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 TTLL9Q3SXZ7 439 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 BRAT1Q6PJG6 821 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 GPRIN1Q7Z2K8 1008 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 ZNF551Q7Z340 670 aaPredicted RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 DUSP18Q8NEJ0 188 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 NLGN2Q8NFZ4 835 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 LILRB1Q8NHL6 650 aaPredicted RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 CHTF18Q8WVB6 975 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 KIAA1143Q96AT1 154 aaPredicted RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 MCOLN1Q9GZU1 580 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 SIK2Q9H0K1 926 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 MIXL1Q9H2W2 232 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 ABCB9Q9NP78 766 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 EXOSC4Q9NPD3 245 aaKnown RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 ZMAT5Q9UDW3 170 aaKnown RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 MAN2B2Q9Y2E5 1009 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 ZNF670-ZNF695F2Z2N8 137 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 WNT10BO00744 389 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 TSPAN4O14817 238 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 NDUFA2O43678 99 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 VTNP04004 478 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 MMP2P08253 660 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 ADRA2AP08913 450 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 WARSP23381 471 aaKnown RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 PTPN6P29350 595 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 HOXC13P31276 330 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 BAMBIQ13145 260 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 IHHQ14623 411 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 LCN1P1Q5VSP4 162 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 PRSS42Q7Z5A4 293 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 CTU1Q7Z7A3 348 aaKnown RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 FAM124AQ86V42 546 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 GPSM1Q86YR5 675 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 RASAL3Q86YV0 1011 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 OR8H3Q8N146 312 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 LIX1Q8N485 282 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 NKAPQ8N5F7 415 aaKnown RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 OR4F6Q8NGB9 312 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 OPALINQ96PE5 141 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 HHATLQ9HCP6 504 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 EVA1BQ9NVM1 165 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 RBFOX1Q9NWB1 397 aaKnown RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 CD274Q9NZQ7 290 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 AKT3Q9Y243 479 aa7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 CFAP20Q9Y6A4 193 aaKnown RBP7.77□□□□□ -1.17
HMGXB4-202ENST00000418170 LTBP3Q9NS15 1303 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 H3BUI4 141 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 FZD9O00144 591 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 SCG5P05408 212 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 HMGCLP35914 325 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 TGM4P49221 684 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 DSC3Q14574 896 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 PTPRCAPQ14761 206 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 DCAF4L1Q3SXM0 396 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 IQCCQ4KMZ1 466 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 AFMIDQ63HM1 303 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 NADSYN1Q6IA69 706 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 BHLHA9Q7RTU4 235 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 TAC4Q86UU9 113 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 GPALPP1Q8IXQ4 340 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 CHCHD4Q8N4Q1 142 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 LINC01465Q8N7H1 131 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 RNF34Q969K3 372 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 HSH2DQ96JZ2 352 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 MSLNLQ96KJ4 702 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 SENP8Q96LD8 212 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 ZNF578Q96N58 590 aaPredicted RBP7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 MED10Q9BTT4 135 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 CATSPERBQ9H7T0 1116 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 ERVMER34-1Q9H9K5 563 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 RNF19AQ9NV58 838 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 MS4A12Q9NXJ0 267 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 COL4A4P53420 1690 aaPredicted RBP7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 HAS3O00219 553 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 OR7A17O14581 309 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 TOR1AO14656 332 aa7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 RPP40O75818 363 aaKnown RBP7.76□□□□□ -1.17
HMGXB4-202ENST00000418170 SERPINI2O75830 405 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms