RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 SLC34A3Q8N130 599 aa12.29□□□□□ -0.44
LINC00339-202ENST00000416769 FBXO36Q8NEA4 188 aa12.29□□□□□ -0.44
LINC00339-202ENST00000416769 OR2L8Q8NGY9 312 aa12.29□□□□□ -0.44
LINC00339-202ENST00000416769 STT3BQ8TCJ2 826 aa12.29□□□□□ -0.44
LINC00339-202ENST00000416769 DENND1AQ8TEH3 1009 aa12.29□□□□□ -0.44
LINC00339-202ENST00000416769 MFSD3Q96ES6 412 aa12.29□□□□□ -0.44
LINC00339-202ENST00000416769 CCDC120Q96HB5 630 aa12.29□□□□□ -0.44
LINC00339-202ENST00000416769 TRIM56Q9BRZ2 755 aaKnown RBP12.29□□□□□ -0.44
LINC00339-202ENST00000416769 ZC3H7BQ9UGR2 993 aaKnown RBP12.29□□□□□ -0.44
LINC00339-202ENST00000416769 C3orf18Q9UK00 162 aa12.29□□□□□ -0.44
LINC00339-202ENST00000416769 CHMP2BQ9UQN3 213 aa12.29□□□□□ -0.44
LINC00339-202ENST00000416769 MTORP42345 2549 aa12.29□□□□□ -0.44
LINC00339-202ENST00000416769 SETD2Q9BYW2 2564 aaPredicted RBP12.28□□□□□ -0.44
LINC00339-202ENST00000416769 TRGV8A0A0C4DH27 118 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 A0A1W2PPV9 198 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 HYKKA2RU49 373 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 FITM1A5D6W6 292 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 GPC4O75487 556 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 KRT38O76015 456 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 HPP00738 406 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 EIF2S1P05198 315 aaKnown RBP12.28□□□□□ -0.44
LINC00339-202ENST00000416769 CD63P08962 238 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 GSTM1P09488 218 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 ZGLP1P0C6A0 271 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 FAM153BP0C7A2 387 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 OR56A5P0C7T3 313 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 ACPPP15309 386 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 PAMP19021 973 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 ARSFP54793 590 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 PER3P56645 1201 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 ARG2P78540 354 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 GSTM4Q03013 218 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 FRG1Q14331 258 aaKnown RBP12.28□□□□□ -0.44
LINC00339-202ENST00000416769 GRM7Q14831 915 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 FASTKD3Q14CZ7 662 aaKnown RBP12.28□□□□□ -0.44
LINC00339-202ENST00000416769 SYT16Q17RD7 645 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 FAM153CQ494X1 144 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 IRAK1BP1Q5VVH5 260 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 STEAP4Q687X5 459 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 CES3Q6UWW8 571 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 DCUN1D3Q8IWE4 304 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 BCORP1Q8N888 145 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 NR4A3Q92570 626 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 WDR83Q9BRX9 315 aaKnown RBP12.28□□□□□ -0.44
LINC00339-202ENST00000416769 TXLNGYQ9BZA5 131 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 SEMA3GQ9NS98 782 aa12.28□□□□□ -0.44
LINC00339-202ENST00000416769 NCOA6Q14686 2063 aaPredicted RBP12.27□□□□□ -0.45
LINC00339-202ENST00000416769 ZCWPW2A0A1B0GU75 182 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 C19orf84I3L1E1 186 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 RASGRF2O14827 1237 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 KLHL41O60662 606 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 UNC5CO95185 931 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 S1PR4O95977 384 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 STATHP02808 62 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 F7P08709 466 aaPredicted RBP12.27□□□□□ -0.45
LINC00339-202ENST00000416769 PRR35P0CG20 571 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 TNFSF10P50591 281 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 KRTAP10-9P60411 292 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 ATG9BQ674R7 924 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 KIAA0930Q6ICG6 404 aaPredicted RBP12.27□□□□□ -0.45
LINC00339-202ENST00000416769 EMBQ6PCB8 327 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 GFRALQ6UXV0 394 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 C3orf62Q6ZUJ4 267 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 TRMT10CQ7L0Y3 403 aaKnown RBP12.27□□□□□ -0.45
LINC00339-202ENST00000416769 TTC29Q8NA56 475 aaPredicted RBP12.27□□□□□ -0.45
LINC00339-202ENST00000416769 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC00339-202ENST00000416769 GSDMBQ8TAX9 411 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 RELTQ969Z4 430 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 ZNF669Q96BR6 464 aaPredicted RBP12.27□□□□□ -0.45
LINC00339-202ENST00000416769 FAM136AQ96C01 138 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 ACAT2Q9BWD1 397 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 CDC42EP4Q9H3Q1 356 aaKnown RBP12.27□□□□□ -0.45
LINC00339-202ENST00000416769 ZNF304Q9HCX3 659 aa12.27□□□□□ -0.45
LINC00339-202ENST00000416769 IGHV3-20A0A0C4DH32 117 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 MAP2K7O14733 419 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 VAPBO95292 243 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 WDPCPO95876 746 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 ITGAMP11215 1152 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 AOAHP28039 575 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 SSTR1P30872 391 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 GPX6P59796 221 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 PRAMEP78395 509 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 MAT1AQ00266 395 aaKnown RBP12.26□□□□□ -0.45
LINC00339-202ENST00000416769 CRYMQ14894 314 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 LONRF1Q17RB8 773 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 HKDC1Q2TB90 917 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 CNSTQ6PJW8 725 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 AFTPHQ6ULP2 937 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 LMNTD2Q8IXW0 634 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 GSPT2Q8IYD1 628 aaKnown RBP12.26□□□□□ -0.45
LINC00339-202ENST00000416769 AMER3Q8N944 861 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 OR2L3Q8NG85 312 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 OR2A1Q8NGT9 310 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 OR6P1Q8NGX9 317 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 OR4L1Q8NH43 312 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 AENQ8WTP8 325 aaKnown RBP12.26□□□□□ -0.45
LINC00339-202ENST00000416769 CAVIN3Q969G5 261 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 NACC2Q96BF6 587 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 MIEF2Q96C03 454 aa12.26□□□□□ -0.45
LINC00339-202ENST00000416769 CFAP36Q96G28 342 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms