RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 PEX5P50542 639 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 LIMK2P53671 638 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 PITX1P78337 314 aaPredicted RBP4.46□□□□□ -1.7
PTPRK-210ENST00000415055 COL10A1Q03692 680 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 CDK18Q07002 472 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 FOXM1Q08050 763 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 LRMPQ12912 555 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 CHAF1BQ13112 559 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 NME3Q13232 169 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 MAMLD1Q13495 774 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 TRA2AQ13595 282 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTPRK-210ENST00000415055 NFATC4Q14934 902 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 STK38Q15208 465 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 PRICKLE4Q2TBC4 344 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 ZNF805Q5CZA5 627 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 ZRANB3Q5FWF4 1079 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 RBM20Q5T481 1227 aaKnown RBP4.46□□□□□ -1.7
PTPRK-210ENST00000415055 FAM205BPQ63HN1 556 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 FAM90A2PQ658T7 463 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 KRT39Q6A163 491 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 ANKRD40Q6AI12 368 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 FAM173BQ6P4H8 233 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 TMEM270Q6UE05 265 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 INTS8Q75QN2 995 aaKnown RBP4.46□□□□□ -1.7
PTPRK-210ENST00000415055 R3HCC1LQ7Z5L2 792 aaKnown RBP4.46□□□□□ -1.7
PTPRK-210ENST00000415055 ADGRG5Q8IZF4 528 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 SCML4Q8N228 414 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.46□□□□□ -1.7
PTPRK-210ENST00000415055 PCDH20Q8N6Y1 951 aaKnown RBP4.46□□□□□ -1.7
PTPRK-210ENST00000415055 IQUBQ8NA54 791 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 FBXL13Q8NEE6 735 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 OR4D9Q8NGE8 314 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 CCL4L1Q8NHW4 92 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 OR1E3Q8WZA6 343 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 SEMA4DQ92854 862 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 FUBP1Q96AE4 644 aaKnown RBP4.46□□□□□ -1.7
PTPRK-210ENST00000415055 C19orf60Q96EN9 201 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 STAMBPL1Q96FJ0 436 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 EEF2KMTQ96G04 330 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 APOPT1Q96IL0 206 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 PSMB7Q99436 277 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 BARD1Q99728 777 aaKnown RBP4.46□□□□□ -1.7
PTPRK-210ENST00000415055 PRMT1Q99873 361 aaKnown RBP4.46□□□□□ -1.7
PTPRK-210ENST00000415055 TRIM62Q9BVG3 475 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 ULBP3Q9BZM4 244 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 CUEDC2Q9H467 287 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 APMAPQ9HDC9 416 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 KRT84Q9NSB2 600 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 DMAC2Q9NW81 257 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 RAB20Q9NX57 234 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 TMEM9Q9P0T7 183 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 HCN3Q9P1Z3 774 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 ENTPD4Q9Y227 616 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 DRG1Q9Y295 367 aaKnown RBP4.46□□□□□ -1.7
PTPRK-210ENST00000415055 OR51B4Q9Y5P0 310 aa4.46□□□□□ -1.7
PTPRK-210ENST00000415055 C3orf70A6NLC5 250 aaPredicted RBP4.45□□□□□ -1.7
PTPRK-210ENST00000415055 ZAR1LA6NP61 321 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 AHRRA9YTQ3 701 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 STX16-NPEPL1H3BU86 382 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 PDXKO00764 312 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 STX16O14662 325 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 POLR1CO15160 346 aaPredicted RBP4.45□□□□□ -1.7
PTPRK-210ENST00000415055 POLR2DO15514 142 aaKnown RBP4.45□□□□□ -1.7
PTPRK-210ENST00000415055 DPM1O60762 260 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 GRAP2O75791 330 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 TSPAN9O75954 239 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 THRAP10827 490 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 ABCD3P28288 659 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 CD1CP29017 333 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 OR1E1P30953 314 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 SERPINH1P50454 418 aaKnown RBP4.45□□□□□ -1.7
PTPRK-210ENST00000415055 CCR9P51686 369 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 CDH4P55283 916 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 RPP30P78346 268 aaKnown RBP4.45□□□□□ -1.7
PTPRK-210ENST00000415055 MC2RQ01718 297 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 OCA2Q04671 838 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 RAD51Q06609 339 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 ILF3Q12906 894 aaKnown RBP eCLIP4.45□□□□□ -1.7
PTPRK-210ENST00000415055 CUL2Q13617 745 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 CUL4AQ13619 759 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 THOC5Q13769 683 aaKnown RBP4.45□□□□□ -1.7
PTPRK-210ENST00000415055 TSTQ16762 297 aaKnown RBP4.45□□□□□ -1.7
PTPRK-210ENST00000415055 WSCD2Q2TBF2 565 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 DENND2CQ68D51 928 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 KCTD16Q68DU8 428 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 SLC30A9Q6PML9 568 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 LCLAT1Q6UWP7 414 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 CLEC9AQ6UXN8 241 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 LRRC31Q6UY01 552 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 LEKR1Q6ZMV7 388 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 GDF7Q7Z4P5 450 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 GALNT5Q7Z7M9 940 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 MRGPREQ86SM8 312 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 SLC47A2Q86VL8 602 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 MMP21Q8N119 569 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 TMEM132CQ8N3T6 1108 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 LSMEM1Q8N8F7 131 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 FAM71DQ8N9W8 422 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 DCAF4L2Q8NA75 395 aa4.45□□□□□ -1.7
PTPRK-210ENST00000415055 OR56A4Q8NGH8 313 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms