RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 PIEZO1Q92508 2521 aa12.75□□□□□ -0.37
CNN3-203ENST00000415017 IGHV5-51A0A0C4DH38 117 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 IGHV5-10-1A0A0J9YXX1 117 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 D6RAR5 112 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 H3BMH7 237 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 AZIN1O14977 448 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 LCMT2O60294 686 aaKnown RBP12.74□□□□□ -0.37
CNN3-203ENST00000415017 NRP2O60462 931 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 GFRA3O60609 400 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 CTSVO60911 334 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 HSPA4LO95757 839 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 CAPN1P07384 714 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 CDK4P11802 303 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 NEFHP12036 1026 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 HGFP14210 728 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 EZRP15311 586 aaKnown RBP12.74□□□□□ -0.37
CNN3-203ENST00000415017 CXCR2P25025 360 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 GSTM2P28161 218 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 AHRP35869 848 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 SCTRP47872 440 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 RPL14P50914 215 aaKnown RBP12.74□□□□□ -0.37
CNN3-203ENST00000415017 PDX1P52945 283 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 SLBPQ14493 270 aaKnown RBP eCLIP12.74□□□□□ -0.37
CNN3-203ENST00000415017 TRIP6Q15654 476 aaKnown RBP12.74□□□□□ -0.37
CNN3-203ENST00000415017 RBBP7Q16576 425 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 AMZ1Q400G9 498 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 TTC19Q6DKK2 380 aaPredicted RBP12.74□□□□□ -0.37
CNN3-203ENST00000415017 CGB2Q6NT52 195 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 ARMC6Q6NXE6 501 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 IRGCQ6NXR0 463 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 USP53Q70EK8 1073 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 VN1R5Q7Z5H4 357 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 TMPRSS11BQ86T26 416 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 CACTIN-AS1Q8N1I8 211 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 ANKRD53Q8N9V6 530 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 OR7G3Q8NG95 312 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 PIWIL2Q8TC59 973 aaKnown RBP12.74□□□□□ -0.37
CNN3-203ENST00000415017 PRR11Q96HE9 360 aaPredicted RBP12.74□□□□□ -0.37
CNN3-203ENST00000415017 AHCYL2Q96HN2 611 aaKnown RBP12.74□□□□□ -0.37
CNN3-203ENST00000415017 OR2A5Q96R48 311 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 KCNA7Q96RP8 456 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 AIF1LQ9BQI0 150 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 TUBB1Q9H4B7 451 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 ZNF768Q9H5H4 540 aaKnown RBP12.74□□□□□ -0.37
CNN3-203ENST00000415017 PNPOQ9NVS9 261 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 CCL27Q9Y4X3 112 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 KIF26BQ2KJY2 2108 aa12.74□□□□□ -0.37
CNN3-203ENST00000415017 SPTBP11277 2137 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 SLC9B1P1A6NJY1 282 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 TMEM233B4DJY2 109 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 FOXE1O00358 373 aaPredicted RBP12.73□□□□□ -0.37
CNN3-203ENST00000415017 HAT1O14929 419 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 RFPL3O75679 317 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 ZBTB11O95625 1053 aaPredicted RBP12.73□□□□□ -0.37
CNN3-203ENST00000415017 PVRP15151 417 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 NELFEP18615 380 aaKnown RBP12.73□□□□□ -0.37
CNN3-203ENST00000415017 PIK3CBP42338 1070 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 INHBCP55103 352 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 TRA2AQ13595 282 aaKnown RBP eCLIP12.73□□□□□ -0.37
CNN3-203ENST00000415017 TSTA3Q13630 321 aaPredicted RBP12.73□□□□□ -0.37
CNN3-203ENST00000415017 ZRSR2Q15696 482 aaKnown RBP12.73□□□□□ -0.37
CNN3-203ENST00000415017 PAGE2BQ5JRK9 111 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 FAM219BQ5XKK7 198 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 FRG2Q64ET8 278 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 TMIGD1Q6UXZ0 262 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 FAM92BQ6ZTR7 304 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 TRIM46Q7Z4K8 759 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 SLCO6A1Q86UG4 719 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 LRRC34Q8IZ02 419 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 D2HGDHQ8N465 521 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 CDYL2Q8N8U2 506 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 DCBLD1Q8N8Z6 715 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 C19orf47Q8N9M1 422 aaKnown RBP12.73□□□□□ -0.37
CNN3-203ENST00000415017 METTL6Q8TCB7 284 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 UBE2E3Q969T4 207 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 ATP6V1E2Q96A05 226 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 THAP11Q96EK4 314 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 TCTN2Q96GX1 697 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 TGM7Q96PF1 710 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 FRG2BQ96QU4 278 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 GFM1Q96RP9 751 aaKnown RBP12.73□□□□□ -0.37
CNN3-203ENST00000415017 FAM60AQ9NP50 221 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 ATXN7L1Q9ULK2 861 aaPredicted RBP12.73□□□□□ -0.37
CNN3-203ENST00000415017 KLHL20Q9Y2M5 609 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 PCDHGA4Q9Y5G9 962 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 PCDHGA11Q9Y5H2 935 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 AP1M2Q9Y6Q5 423 aa12.73□□□□□ -0.37
CNN3-203ENST00000415017 SLCO1B7G3V0H7 640 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 MANBAO00462 879 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 HGSO14964 777 aaPredicted RBP12.72□□□□□ -0.37
CNN3-203ENST00000415017 HCRTR1O43613 425 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 PRAMEF10O60809 474 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 CEACAM1P13688 526 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 CDH3P22223 829 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 PRPH2P23942 346 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 SERPINB1P30740 379 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 CCKBRP32239 447 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 BCL6P41182 706 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 GCGRP47871 477 aa12.72□□□□□ -0.37
CNN3-203ENST00000415017 HTR6P50406 440 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms