RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 FAM120CQ9NX05 1096 aaKnown RBP13.37□□□□□ -0.27
SMARCA4-202ENST00000413806 RFPL1O75677 317 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 F2P00734 622 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 MPIP34949 423 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 XKP51811 444 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 VITQ6UXI7 678 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 OVCA2Q8WZ82 227 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 SLC22A18Q96BI1 424 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 CMTM7Q96FZ5 175 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 RBM18Q96H35 190 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 PHOX2BQ99453 314 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 COMMD4Q9H0A8 199 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 CDC7O00311 574 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 PRMT3O60678 531 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 HMGN1P05114 100 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 EFNA1P20827 205 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 RHEBQ15382 184 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 PRAMEF14Q5SWL7 426 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 PRAMEF13Q5VWM6 474 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 SLC2A7Q6PXP3 512 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 INO80EQ8NBZ0 244 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 AURKBQ96GD4 344 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 ZFP3Q96NJ6 502 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 CYP2S1Q96SQ9 504 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 PTPN18Q99952 460 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 RIOK2Q9BVS4 552 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 CCDC106Q9BWC9 280 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 ITPAQ9BY32 194 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 ZNF395Q9H8N7 513 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 GALPQ9UBC7 116 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 UBXN7O94888 489 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 IL7RP16871 459 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 CD40LGP29965 261 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 HOXD12P35452 270 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 CBLBQ13191 982 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 TNFAIP8L2Q6P589 184 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 KLHL36Q8N4N3 616 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 ZNF366Q8N895 744 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 PYURFQ96I23 114 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 ZNF641Q96N77 438 aaPredicted RBP13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 MAPKAP1Q9BPZ7 522 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 TOPAZ1Q8N9V7 1692 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 IL7P13232 177 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 DNASE1L1P49184 302 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 UFM1P61960 85 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 CDKL1Q00532 357 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 ABHD18Q0P651 414 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 GATAD2BQ8WXI9 593 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 PEX13Q92968 403 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 MGME1Q9BQP7 344 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 DPAGT1Q9H3H5 408 aa13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 CHD2O14647 1828 aaKnown RBP13.36□□□□□ -0.27
SMARCA4-202ENST00000413806 SH3PXD2BA1X283 911 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 TLR4O00206 839 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 FPR1P21462 350 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 NDUFS1P28331 727 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 AFF1P51825 1210 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 PLA2G16P53816 162 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 KCNC3Q14003 757 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 CCL14Q16627 93 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 OGFRL1Q5TC84 451 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 OR4F3Q6IEY1 312 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 PAMR1Q6UXH9 720 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 PLCZ1Q86YW0 608 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 ZCCHC10Q8TBK6 192 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 MAFIPQ8WZ33 124 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 PCDHGB1Q9Y5G3 927 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 NFKBIEO00221 500 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 HAPLN1P10915 354 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 ACSL1P33121 698 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 HTR2BP41595 481 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 RBM34P42696 430 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 GRK6P43250 576 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 CBX5P45973 191 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 LSAMPQ13449 338 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 DSC3Q14574 896 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 MYLK3Q32MK0 819 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 SLC30A6Q6NXT4 461 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 THOC6Q86W42 341 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 ZNF420Q8TAQ5 688 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 SLC2A13Q96QE2 648 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 IFT27Q9BW83 186 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 POLE4Q9NR33 117 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 CACNG4Q9UBN1 327 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 TTC24A2A3L6 582 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 M0R233 179 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 ARVCFO00192 962 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 CSNK2A2P19784 350 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 AVPR1BP47901 424 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 CYS1Q717R9 158 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 DNAJA4Q8WW22 397 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 METTL21AQ8WXB1 218 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 BIRC7Q96CA5 298 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 POLR2J2Q9GZM3 115 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 NARSO43776 548 aaKnown RBP13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 ZNF14P17017 642 aaPredicted RBP13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 PROZP22891 400 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 AKT2P31751 481 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 RIPPLY1Q0D2K3 151 aa13.35□□□□□ -0.27
SMARCA4-202ENST00000413806 TPRG1Q6ZUI0 275 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms