RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 GALNT10Q86SR1 603 aa13.5□□□□□ -0.25
CLTCL1-201ENST00000412649 SH3KBP1Q96B97 665 aa13.5□□□□□ -0.25
CLTCL1-201ENST00000412649 YIPF6Q96EC8 236 aa13.5□□□□□ -0.25
CLTCL1-201ENST00000412649 BTN2A3PQ96KV6 586 aa13.5□□□□□ -0.25
CLTCL1-201ENST00000412649 TEX37Q96LM6 180 aa13.5□□□□□ -0.25
CLTCL1-201ENST00000412649 MBD2Q9UBB5 411 aa13.5□□□□□ -0.25
CLTCL1-201ENST00000412649 NUP50Q9UKX7 468 aa13.5□□□□□ -0.25
CLTCL1-201ENST00000412649 PRG3Q9Y2Y8 225 aaPredicted RBP13.5□□□□□ -0.25
CLTCL1-201ENST00000412649 MAB21L2Q9Y586 359 aa13.5□□□□□ -0.25
CLTCL1-201ENST00000412649 IGKV6-21A0A0C4DH24 114 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 TEX51A0A1B0GUA7 166 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 LOC730098B7Z3J9 87 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 SPNP16150 400 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 FSHRP23945 695 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 DGKEP52429 567 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 RPL6Q02878 288 aaKnown RBP13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 ADAM15Q13444 863 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 EIF4HQ15056 248 aaKnown RBP13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 ZNF648Q5T619 568 aaPredicted RBP13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 CPZQ66K79 652 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 KIAA1841Q6NSI8 718 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 ANKRD54Q6NXT1 300 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 UBE2R2Q712K3 238 aaPredicted RBP13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 FGD2Q7Z6J4 655 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 MON1AQ86VX9 555 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 DUSP26Q9BV47 211 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 HEBP1Q9NRV9 189 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 FLRT1Q9NZU1 646 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 OSGIN1Q9UJX0 560 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 PCDHB9Q9Y5E1 797 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 KCNK2O95069 426 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 GLUD1P00367 558 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 ITPKAP23677 461 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 IL32P24001 234 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 TGFBR1P36897 503 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 OR1G1P47890 313 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 RPIAP49247 311 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 EN1Q05925 392 aaPredicted RBP13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 LIPKQ5VXJ0 399 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 SLC46A3Q7Z3Q1 461 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 DENND6BQ8NEG7 585 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 FAM46DQ8NEK8 389 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 TEX47Q8TBZ9 253 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 CLIP3Q96DZ5 547 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 TINF2Q9BSI4 451 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 DUSP21Q9H596 190 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 DNAJC27Q9NZQ0 273 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 DYRK1BQ9Y463 629 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 RAI2Q9Y5P3 530 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 CHST10O43529 356 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 UGT2B17O75795 530 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 CTPS1P17812 591 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 EPORP19235 508 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 CDH18Q13634 790 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 COMMD7Q86VX2 200 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 FAM217AQ8IXS0 508 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 RGL4Q8IZJ4 473 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 MEIOBQ8N635 442 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 AQP11Q8NBQ7 271 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 ARRDC4Q8NCT1 418 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 GPRC5AQ8NFJ5 357 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 SCAMP5Q8TAC9 235 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 SLC7A6Q92536 515 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 ATOH8Q96SQ7 321 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 TPT1P8Q9HAU6 139 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 FNIP2Q9P278 1114 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 STUB1Q9UNE7 303 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 A0A1W2PQL4 384 aaPredicted RBP13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 TRAPPC2P0DI81 140 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 TRAPPC2BP0DI82 140 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 BCKDHAP12694 445 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 ANXA11P50995 505 aaKnown RBP13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 PPP3R1P63098 170 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 CHMP1BQ7LBR1 199 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 RNF130Q86XS8 419 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 PEX13Q92968 403 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 DHRS9Q9BPW9 319 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 CENPOQ9BU64 300 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 TNKS2Q9H2K2 1166 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 C3orf14Q9HBI5 128 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 GULP1Q9UBP9 304 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 KCNN3Q9UGI6 736 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 ATPIF1Q9UII2 106 aa13.49□□□□□ -0.25
CLTCL1-201ENST00000412649 A8MX80 341 aa13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 CXCR2P25025 360 aa13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 FAPQ12884 760 aa13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 PPIGQ13427 754 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 HEPACAMQ14CZ8 416 aa13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 KLHL22Q53GT1 634 aa13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 RUNDC3AQ59EK9 446 aa13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 LETMD1Q6P1Q0 360 aa13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 RIMKLAQ8IXN7 391 aa13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 CARNMT1Q8N4J0 409 aa13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 REPS1Q96D71 796 aa13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 FNDC11Q9BVV2 318 aa13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 SLC29A3Q9BZD2 475 aa13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 SLIRPQ9GZT3 109 aaKnown RBP13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 POLR2J3Q9H1A7 115 aaKnown RBP13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 TUBB1Q9H4B7 451 aa13.48□□□□□ -0.25
CLTCL1-201ENST00000412649 DNAJC11Q9NVH1 559 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms