RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 GLRA2P23416 452 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 RARRES1P49788 294 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 ADARB1P78563 741 aaKnown RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 CSTF1Q05048 431 aaKnown RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 PPP3CAQ08209 521 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 DRAP1Q14919 205 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 AKIRIN2Q53H80 203 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 ARHGAP40Q5TG30 622 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 REP15Q6BDI9 236 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 KIAA1161Q6NSJ0 714 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 RPL13AP3Q6NVV1 102 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 EPGNQ6UW88 154 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 NXPE4Q6UWF7 544 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 SLC46A3Q7Z3Q1 461 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 ADGRF4Q8IZF3 695 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 EIF4E3Q8N5X7 224 aaKnown RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 PARP16Q8N5Y8 322 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 EMC1Q8N766 993 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 C7orf31Q8N865 590 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 L3MBTL4Q8NA19 623 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 LMO3Q8TAP4 145 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 C1orf54Q8WWF1 131 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 RSC1A1Q92681 617 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 WNT8BQ93098 351 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 PPWD1Q96BP3 646 aaKnown RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 BOD1Q96IK1 185 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 CELF6Q96J87 481 aaKnown RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 OR2A14Q96R47 310 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 KATNB1Q9BVA0 655 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 REXO4Q9GZR2 422 aaKnown RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 TOLLIPQ9H0E2 274 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 MED9Q9NWA0 146 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 OSGIN1Q9UJX0 560 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 GPR52Q9Y2T5 361 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 MRPS18CQ9Y3D5 142 aaKnown RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 A0A1W2PPC1 479 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 BTBD17A6NE02 478 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 OR6C75A6NL08 312 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 DUXAA6NLW8 204 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 SOCS2O14508 198 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 CACNG3O60359 315 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 NRP2O60462 931 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 TRIM3O75382 744 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 WDR47O94967 919 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 MT-CYBP00156 380 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 PLK1P53350 603 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 DEFA1P59665 94 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 DEFA3P59666 94 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 MS4A2Q01362 244 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 POU4F1Q01851 419 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 KLF10Q13118 480 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 NAE1Q13564 534 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 SOWAHCQ53LP3 525 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 IFIT1BQ5T764 474 aaKnown RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 HACD2Q6Y1H2 254 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 RASAL3Q86YV0 1011 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 PPIL6Q8IXY8 311 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 SETD6Q8TBK2 473 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 ZNF564Q8TBZ8 553 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 TFAP2BQ92481 460 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 IP6K1Q92551 441 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 RHBDF1Q96CC6 855 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 MARS2Q96GW9 593 aaKnown RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 NARS2Q96I59 477 aaKnown RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 RBP7Q96R05 134 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 CYP2S1Q96SQ9 504 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 TCEAL7Q9BRU2 100 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 C20orf27Q9GZN8 174 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 ALG2Q9H553 416 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 PPP4R1LQ9P1A2 415 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 IFT80Q9P2H3 777 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 OPTCQ9UBM4 332 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 SPASTQ9UBP0 616 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 C19orf53Q9UNZ5 99 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 C22orf46C9J442 243 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 E9PAM4 449 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 SMLR1H3BR10 107 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 SLC28A1O00337 649 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 EIF3DO15371 548 aaKnown RBP eCLIP5.08□□□□□ -1.6
HERC4-205ENST00000412272 LCMT2O60294 686 aaKnown RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 PAX1P15863 534 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 CPN2P22792 545 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 MAPK3P27361 379 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 HLA-DMAP28067 261 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 GABRB2P47870 512 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 PRELPP51888 382 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 INSM1Q01101 510 aaPredicted RBP5.08□□□□□ -1.6
HERC4-205ENST00000412272 FAM74A1Q5RGS3 127 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 PRAMEF19Q5SWL8 479 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 RIPPLY2Q5TAB7 128 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 LRRC66Q68CR7 880 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 DENND6AQ8IWF6 608 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 LRRC17Q8N6Y2 441 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 GMCL1P1Q8NEA9 526 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 BPIFB1Q8TDL5 484 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 C2CD4CQ8TF44 421 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 R3HDM4Q96D70 268 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 LINGO1Q96FE5 620 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 MS4A3Q96HJ5 214 aa5.08□□□□□ -1.6
HERC4-205ENST00000412272 SMOQ99835 787 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms