RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SECISBP2Q96T21 854 aaKnown RBP4.62□□□□□ -1.67
LSM5-205ENST00000409952 THAP2Q9H0W7 228 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 GKN1Q9NS71 199 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 FAM207AQ9NSI2 230 aaPredicted RBP4.62□□□□□ -1.67
LSM5-205ENST00000409952 TMEM45AQ9NWC5 275 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 PKD2L2Q9NZM6 624 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 LRWD1Q9UFC0 647 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 SERGEFQ9UGK8 458 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 PCSK1NQ9UHG2 260 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 ADAM21Q9UKJ8 722 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 WDR83OSQ9Y284 106 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 JRKLQ9Y4A0 524 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 LOXL2Q9Y4K0 774 aa4.62□□□□□ -1.67
LSM5-205ENST00000409952 SRPRBQ9Y5M8 271 aaKnown RBP4.62□□□□□ -1.67
LSM5-205ENST00000409952 GAGE12JA6NER3 117 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 LRRIQ4A6NIV6 560 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 H3BMM5 538 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 J3KR12 359 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 K7EQM0 130 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 GRID2O43424 1007 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 SCO2O43819 266 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 NME2P1O60361 137 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 SNX3O60493 162 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 ERLIN1O75477 346 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 GMNNO75496 209 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 SURF6O75683 361 aaKnown RBP4.61□□□□□ -1.67
LSM5-205ENST00000409952 ASGR1P07306 291 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 ASNSP08243 561 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 IQCF3P0C7M6 154 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 DLATP10515 647 aaKnown RBP4.61□□□□□ -1.67
LSM5-205ENST00000409952 RPA2P15927 270 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 NUMBP49757 651 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 RARRES1P49788 294 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 VCPP55072 806 aaKnown RBP4.61□□□□□ -1.67
LSM5-205ENST00000409952 P2RX3P56373 397 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 SEC61BP60468 96 aaKnown RBP4.61□□□□□ -1.67
LSM5-205ENST00000409952 MBTD1Q05BQ5 628 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 CACNG1Q06432 222 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 SLC3A1Q07837 685 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 KRT31Q15323 416 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 RBBP7Q16576 425 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 CA9Q16790 459 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 DUSP6Q16828 381 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 ELFN2Q5R3F8 820 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 PLXDC2Q6UX71 529 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 ANGPTL8Q6UXH0 198 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 MON1BQ7L1V2 547 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 ZNF367Q7RTV3 350 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 ADGRD2Q7Z7M1 963 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 AADATQ8N5Z0 425 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 STKLD1Q8NE28 680 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.61□□□□□ -1.67
LSM5-205ENST00000409952 NTN5Q8WTR8 489 aaPredicted RBP4.61□□□□□ -1.67
LSM5-205ENST00000409952 CCDC107Q8WV48 283 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 WBP2Q969T9 261 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 THOC1Q96FV9 657 aaKnown RBP4.61□□□□□ -1.67
LSM5-205ENST00000409952 PGM2Q96G03 612 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 TPD52L3Q96J77 140 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 MAGED4Q96JG8 741 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 ZNF583Q96ND8 569 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 LRFN5Q96NI6 719 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 ZNF607Q96SK3 696 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 PLIN2Q99541 437 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 SH2D3AQ9BRG2 576 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 MMTAG2Q9BU76 263 aaKnown RBP4.61□□□□□ -1.67
LSM5-205ENST00000409952 NFKBIZQ9BYH8 718 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 VCX2Q9H322 139 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 MAP6D1Q9H9H5 199 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 GLRX2Q9NS18 164 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 MIOSQ9NXC5 875 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 MIS18AQ9NYP9 233 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 GTSE1Q9NYZ3 720 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 MALT1Q9UDY8 824 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 SPIN1Q9Y657 262 aaPredicted RBP4.61□□□□□ -1.67
LSM5-205ENST00000409952 PCDH11YQ9BZA8 1340 aa4.61□□□□□ -1.67
LSM5-205ENST00000409952 A0A0U1RQV5 110 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 MED19A0JLT2 244 aaPredicted RBP4.6□□□□□ -1.67
LSM5-205ENST00000409952 TMEM89A2RUT3 159 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 FAM47DPA6NHR8 397 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 NPIPA3F8WFD2 350 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 MS4A18H0YCH9 400 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 PES1O00541 588 aaKnown RBP4.6□□□□□ -1.67
LSM5-205ENST00000409952 TIMM23O14925 209 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 LDB2O43679 373 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 LRP3O75074 770 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 NDUFS7O75251 213 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 STBD1O95210 358 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 SFTPBP07988 381 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 NUDT17P0C025 328 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 PTPN6P29350 595 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 SSTR1P30872 391 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 TNFRSF17Q02223 184 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 ZNF268Q14587 947 aaPredicted RBP4.6□□□□□ -1.67
LSM5-205ENST00000409952 NONOQ15233 471 aaKnown RBP eCLIP4.6□□□□□ -1.67
LSM5-205ENST00000409952 PPP1R7Q15435 360 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 HSP90AB3PQ58FF7 597 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 NCR3LG1Q68D85 454 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 KLHL10Q6JEL2 608 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 KLC3Q6P597 504 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 C16orf87Q6PH81 154 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms