RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 LINC00696Q6ZRV3 163 aa14.01□□□□□ -0.17
CBX3-203ENST00000409747 RIPOR1Q6ZS17 1223 aa14.01□□□□□ -0.17
CBX3-203ENST00000409747 PCGF5Q86SE9 256 aa14.01□□□□□ -0.17
CBX3-203ENST00000409747 LRRC56Q8IYG6 542 aaPredicted RBP14.01□□□□□ -0.17
CBX3-203ENST00000409747 CCDC138Q96M89 665 aa14.01□□□□□ -0.17
CBX3-203ENST00000409747 IARS2Q9NSE4 1012 aaKnown RBP14.01□□□□□ -0.17
CBX3-203ENST00000409747 TMEM184CQ9NVA4 438 aa14.01□□□□□ -0.17
CBX3-203ENST00000409747 TAS2R13Q9NYV9 303 aa14.01□□□□□ -0.17
CBX3-203ENST00000409747 NTNG1Q9Y2I2 539 aa14.01□□□□□ -0.17
CBX3-203ENST00000409747 MDC1Q14676 2089 aaKnown RBP14□□□□□ -0.17
CBX3-203ENST00000409747 IGHV1-45A0A0A0MS14 117 aa14□□□□□ -0.17
CBX3-203ENST00000409747 A0A0A6YYC8 382 aaPredicted RBP14□□□□□ -0.17
CBX3-203ENST00000409747 DYTNA2CJ06 578 aa14□□□□□ -0.17
CBX3-203ENST00000409747 H0YIG0 161 aa14□□□□□ -0.17
CBX3-203ENST00000409747 H7BY64 318 aa14□□□□□ -0.17
CBX3-203ENST00000409747 I3L1I5 382 aaPredicted RBP14□□□□□ -0.17
CBX3-203ENST00000409747 ZSCAN12O43309 604 aa14□□□□□ -0.17
CBX3-203ENST00000409747 SERPINA7P05543 415 aa14□□□□□ -0.17
CBX3-203ENST00000409747 CYC1P08574 325 aa14□□□□□ -0.17
CBX3-203ENST00000409747 PRR35P0CG20 571 aa14□□□□□ -0.17
CBX3-203ENST00000409747 ICAM2P13598 275 aa14□□□□□ -0.17
CBX3-203ENST00000409747 CCND1P24385 295 aa14□□□□□ -0.17
CBX3-203ENST00000409747 TBPL1P62380 186 aa14□□□□□ -0.17
CBX3-203ENST00000409747 ARG2P78540 354 aa14□□□□□ -0.17
CBX3-203ENST00000409747 CRYMQ14894 314 aa14□□□□□ -0.17
CBX3-203ENST00000409747 FAM180AQ6UWF9 173 aa14□□□□□ -0.17
CBX3-203ENST00000409747 LAPTM4BQ86VI4 370 aa14□□□□□ -0.17
CBX3-203ENST00000409747 MYO1HQ8N1T3 1032 aa14□□□□□ -0.17
CBX3-203ENST00000409747 AGGF1Q8N302 714 aaeCLIP14□□□□□ -0.17
CBX3-203ENST00000409747 ARHGEF39Q8N4T4 335 aa14□□□□□ -0.17
CBX3-203ENST00000409747 C2CD4AQ8NCU7 369 aaPredicted RBP14□□□□□ -0.17
CBX3-203ENST00000409747 THAP11Q96EK4 314 aa14□□□□□ -0.17
CBX3-203ENST00000409747 PRAP1Q96NZ9 151 aa14□□□□□ -0.17
CBX3-203ENST00000409747 FAM129AQ9BZQ8 928 aa14□□□□□ -0.17
CBX3-203ENST00000409747 ASIC3Q9UHC3 531 aa14□□□□□ -0.17
CBX3-203ENST00000409747 ERRFI1Q9UJM3 462 aaPredicted RBP14□□□□□ -0.17
CBX3-203ENST00000409747 ICE1Q9Y2F5 2266 aa14□□□□□ -0.17
CBX3-203ENST00000409747 HIVEP3Q5T1R4 2406 aa13.99□□□□□ -0.17
CBX3-203ENST00000409747 KCNE1BA0A087WTH5 132 aa13.99□□□□□ -0.17
CBX3-203ENST00000409747 PABPN1LA6NDY0 278 aaKnown RBP13.99□□□□□ -0.17
CBX3-203ENST00000409747 FOXS1O43638 330 aa13.99□□□□□ -0.17
CBX3-203ENST00000409747 BMP10O95393 424 aa13.99□□□□□ -0.17
CBX3-203ENST00000409747 LDLRP01130 860 aa13.99□□□□□ -0.17
CBX3-203ENST00000409747 EDN3P14138 238 aa13.99□□□□□ -0.17
CBX3-203ENST00000409747 EEF1A2Q05639 463 aaKnown RBP13.99□□□□□ -0.17
CBX3-203ENST00000409747 SPANXN3Q5MJ09 141 aa13.99□□□□□ -0.17
CBX3-203ENST00000409747 RPUSD3Q6P087 351 aaKnown RBP13.99□□□□□ -0.17
CBX3-203ENST00000409747 KIAA0408Q6ZU52 694 aa13.99□□□□□ -0.17
CBX3-203ENST00000409747 SLC35F6Q8N357 371 aa13.99□□□□□ -0.17
CBX3-203ENST00000409747 METTL21AQ8WXB1 218 aa13.99□□□□□ -0.17
CBX3-203ENST00000409747 SYNPO2LQ9H987 977 aa13.99□□□□□ -0.17
CBX3-203ENST00000409747 MKL2Q9ULH7 1088 aa13.99□□□□□ -0.17
CBX3-203ENST00000409747 SNX12Q9UMY4 172 aa13.99□□□□□ -0.17
CBX3-203ENST00000409747 LOC102723996A0A087X1L8 192 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 A1L4Q6 167 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 WIPF3A6NGB9 483 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 DNALI1O14645 258 aaPredicted RBP13.98□□□□□ -0.17
CBX3-203ENST00000409747 SLC16A5O15375 505 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 P2RX6O15547 441 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 WFS1O76024 890 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 NSA2O95478 260 aaKnown RBP13.98□□□□□ -0.17
CBX3-203ENST00000409747 RNF224P0DH78 156 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 GRK3P35626 688 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 INAQ16352 499 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 MAMDC2Q7Z304 686 aaPredicted RBP13.98□□□□□ -0.17
CBX3-203ENST00000409747 C17orf64Q86WR6 236 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 PLD3Q8IV08 490 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 ZC3H7AQ8IWR0 971 aaKnown RBP13.98□□□□□ -0.17
CBX3-203ENST00000409747 CAMKVQ8NCB2 501 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 BRIX1Q8TDN6 353 aaKnown RBP13.98□□□□□ -0.17
CBX3-203ENST00000409747 GRHL3Q8TE85 626 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 FAR1Q8WVX9 515 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 NDNQ99608 321 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 MESP1Q9BRJ9 268 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 ZNF700Q9H0M5 742 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 PARVBQ9HBI1 364 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 PTGFRNQ9P2B2 879 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 DOPEY1Q5JWR5 2465 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 FFAR3O14843 346 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 GPR42O15529 346 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 KLHL18O94889 574 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 HIST1H2AGP0C0S8 130 aaPredicted RBP13.98□□□□□ -0.17
CBX3-203ENST00000409747 C8orf89P0DMQ9 161 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 HIST1H2ADP20671 130 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 SOX11P35716 441 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 TMEM205Q6UW68 189 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 GALNT7Q86SF2 657 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 CNTN4Q8IWV2 1026 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 BCORP1Q8N888 145 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 EEF1AKMT1Q8WVE0 214 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 SLCO2A1Q92959 643 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 HIST1H2AHQ96KK5 128 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 HIST1H2AJQ99878 128 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 H2AFJQ9BTM1 129 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 TUBB6Q9BUF5 446 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 C19orf25Q9UFG5 118 aaPredicted RBP13.98□□□□□ -0.17
CBX3-203ENST00000409747 CORO1CQ9ULV4 474 aaPredicted RBP13.98□□□□□ -0.17
CBX3-203ENST00000409747 PDE10AQ9Y233 779 aa13.98□□□□□ -0.17
CBX3-203ENST00000409747 MRPS2Q9Y399 296 aaKnown RBP13.98□□□□□ -0.17
CBX3-203ENST00000409747 UNC79Q9P2D8 2635 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms