RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 SPNS1Q9H2V7 528 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 GORASP2Q9H8Y8 452 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 SPATA6Q9NWH7 488 aaPredicted RBP14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 ATG2BQ96BY7 2078 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 H3BM21 787 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 C1orf105O95561 183 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 CATP04040 527 aaKnown RBP14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 PRNPP04156 253 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 ENTPD1P49961 510 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 NFE2L1Q14494 772 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 PLCL1Q15111 1095 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 LIPJQ5W064 366 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 DOK6Q6PKX4 331 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 FAM83HQ6ZRV2 1179 aaPredicted RBP14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 GALNT13Q8IUC8 556 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 OR56A3Q8NH54 315 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 PHOSPHO2Q8TCD6 241 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 CHFRQ96EP1 664 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 SLC47A1Q96FL8 570 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 CCDC138Q96M89 665 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 SGK2Q9HBY8 427 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 DEC1Q9P2X7 70 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 VPS29Q9UBQ0 182 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 PCDHGA11Q9Y5H2 935 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 MYO9BQ13459 2157 aa14.67□□□□□ -0.06
SCAMP4-202ENST00000409472 NPIPB8E9PQR5 432 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 RFXANKO14593 260 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 SCN2BO60939 215 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 ADAM23O75077 832 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 PRSS23O95084 383 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 SERPINA1P01009 418 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 EIF2S1P05198 315 aaKnown RBP14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 IL12RB1P42701 662 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 KIR3DL1P43629 444 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 GPR1P46091 355 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 YAP1P46937 504 aaKnown RBP14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 CHRNB3Q05901 458 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 GPM6BQ13491 265 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 FAM98BQ52LJ0 330 aaKnown RBP14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 DEPDC1Q5TB30 811 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 GRHL2Q6ISB3 625 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 LPCAT2Q7L5N7 544 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 TMEM179BQ7Z7N9 219 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 GPR180Q86V85 440 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 C1orf52Q8N6N3 182 aaKnown RBP14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 HUS1BQ8NHY5 278 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 FAM120BQ96EK7 910 aaKnown RBP14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 C11orf24Q96F05 449 aaPredicted RBP14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 ITCHQ96J02 903 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 DPH2Q9BQC3 489 aaPredicted RBP14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 SMURF2Q9HAU4 748 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 RAD18Q9NS91 495 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 THG1LQ9NWX6 298 aaKnown RBP14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 PLAGL1Q9UM63 463 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 FAM220BPB1ANY3 271 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 ERN1O75460 977 aaKnown RBP14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 CREG1O75629 220 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 GBAP04062 536 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 LAMP1P11279 417 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 ZNF8P17098 575 aaPredicted RBP14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 FCARP24071 287 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 VASPP50552 380 aaPredicted RBP14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 ARSFP54793 590 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 ARPC4P59998 168 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 MTAPQ13126 283 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 SYTL1Q8IYJ3 562 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 NRSN1Q8IZ57 195 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 C2orf73Q8N5S3 287 aaPredicted RBP14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 OR7G3Q8NG95 312 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 OR8D1Q8WZ84 308 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 IL17FQ96PD4 163 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 TMEM245Q9H330 911 aa14.66□□□□□ -0.06
SCAMP4-202ENST00000409472 PSMD11O00231 422 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 NOBOXO60393 691 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 OXSR1O95747 527 aaPredicted RBP14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 CSTF3Q12996 717 aaKnown RBP14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 KCNC3Q14003 757 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 ELAVL3Q14576 367 aaKnown RBP14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 STARD3Q14849 445 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 HKDC1Q2TB90 917 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 KCTD21Q4G0X4 260 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 CES5AQ6NT32 575 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 NIPAL1Q6NVV3 410 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 CHST15Q7LFX5 561 aaPredicted RBP14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 GPR149Q86SP6 731 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 STK32CQ86UX6 486 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 TMEM132CQ8N3T6 1108 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 SMARCD2Q92925 531 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 SH3KBP1Q96B97 665 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 BDH2Q9BUT1 245 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 DOLKQ9UPQ8 538 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 DOCK8Q8NF50 2099 aa14.65□□□□□ -0.06
SCAMP4-202ENST00000409472 EDDM13A0A1B0GTR0 161 aa14.65□□□□□ -0.07
SCAMP4-202ENST00000409472 H0YIV9 168 aa14.65□□□□□ -0.07
SCAMP4-202ENST00000409472 SAP18O00422 153 aaKnown RBP14.65□□□□□ -0.07
SCAMP4-202ENST00000409472 LZTS3O60299 673 aaPredicted RBP14.65□□□□□ -0.07
SCAMP4-202ENST00000409472 PAPLNO95428 1278 aa14.65□□□□□ -0.07
SCAMP4-202ENST00000409472 ALPLP05186 524 aa14.65□□□□□ -0.07
SCAMP4-202ENST00000409472 COX7A2P14406 83 aa14.65□□□□□ -0.07
SCAMP4-202ENST00000409472 CDH3P22223 829 aa14.65□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms