RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 FAM45BPQ6NSW5 357 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 PNCKQ6P2M8 343 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 PGBD2Q6P3X8 592 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 MFSD7Q6UXD7 560 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ZCCHC23Q6ZST2 131 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 BBS12Q6ZW61 710 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 USP51Q70EK9 711 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 MON1BQ7L1V2 547 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 PRRT2Q7Z6L0 340 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 PHF13Q86YI8 300 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 CARNMT1Q8N4J0 409 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 CBR4Q8N4T8 237 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 PAF1Q8N7H5 531 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 Q8N9G6 341 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 MCUQ8NE86 351 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 BPIFB6Q8NFQ5 453 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 OR10Z1Q8NGY1 313 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 OR6F1Q8NGZ6 308 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 FAM45AQ8TCE6 357 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 LPGAT1Q92604 370 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 USP13Q92995 863 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 NCLNQ969V3 563 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 CIDECQ96AQ7 238 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 ZFYVE19Q96K21 471 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 SLC46A1Q96NT5 459 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ACCSQ96QU6 501 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 SORT1Q99523 831 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 KIFC1Q9BW19 673 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 TTLL2Q9BWV7 592 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 MMP27Q9H306 513 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 DPEP3Q9H4B8 488 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 SERHL2Q9H4I8 314 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ACAD9Q9H845 621 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 JMJD4Q9H9V9 463 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 SCPEP1Q9HB40 452 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ZSCAN32Q9NX65 697 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 KLQ9UEF7 1012 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 TRMT112Q9UI30 125 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 MAGED2Q9UNF1 606 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 COQ4Q9Y3A0 265 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 RAP2CQ9Y3L5 183 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 BAZ2BQ9UIF8 2168 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 DHRS12A0PJE2 317 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 BBIP1A8MTZ0 92 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 A8MU76 341 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 LOC110117498-PIK3R3F6TDL0 507 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 H3BMM5 538 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 TMX2-CTNND1H3BSU7 103 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 PLOD2O00469 737 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 CYB561D2O14569 222 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 SLC9A3R1O14745 358 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 TRIM24O15164 1050 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 SULT1B1O43704 296 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 KCNJ13O60928 360 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 TRIM3O75382 744 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 BANF1O75531 89 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 LYPLA1O75608 230 aaPredicted RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 ZMPSTE24O75844 475 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 OR7A10O76100 309 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 TMEM63AO94886 807 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 CSPG5O95196 566 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 HPRP00739 348 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ATXN1LP0C7T5 689 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 UMPSP11172 480 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ETS1P14921 441 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 IL1R2P27930 398 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ERP29P30040 261 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 HTR2BP41595 481 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 CDKN2BP42772 138 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 MAGEA6P43360 314 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 RGS7P49802 495 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 PLA2G16P53816 162 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 OR2B6P58173 313 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 TAS2R40P59535 323 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 DYNLL1P63167 89 aaKnown RBP5.31□□□□□ -1.56
CLK1-202ENST00000409403 ROR1Q01973 937 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 GHRHRQ02643 423 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 SCRN3Q0VDG4 424 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 COX10Q12887 443 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 RALGDSQ12967 914 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 PRKAA1Q13131 559 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 MAMLD1Q13495 774 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 DPYSL3Q14195 570 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 KCNJ11Q14654 390 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ICAM4Q14773 271 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 PCLAFQ15004 111 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 PAGE2BQ5JRK9 111 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 LDLRAP1Q5SW96 308 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 TREML2Q5T2D2 321 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 VWA5B1Q5TIE3 1220 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 CES4AQ5XG92 561 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 FAM205BPQ63HN1 556 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 LRRC8EQ6NSJ5 796 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ZNF720Q7Z2F6 126 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 MAVSQ7Z434 540 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 ADGRA1Q86SQ6 560 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 PLD3Q8IV08 490 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 WDR49Q8IV35 697 aa5.31□□□□□ -1.56
CLK1-202ENST00000409403 CPNE9Q8IYJ1 553 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms