RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 COL26A1Q96A83 441 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 THAP11Q96EK4 314 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 C10orf90Q96M02 699 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 FUT8Q9BYC5 575 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 ADNPQ9H2P0 1102 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 ZNF304Q9HCX3 659 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 SLC22A14Q9Y267 594 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 DYRK1BQ9Y463 629 aa17.11■□□□□ 0.33
PDLIM2-206ENST00000409141 CNOT3O75175 753 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 ALBP02768 609 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 STATHP02808 62 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 GMPRP36959 345 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 KCNAB2Q13303 367 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 SSPNQ14714 243 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 OR4D1Q15615 310 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 CATSPEREQ5SY80 951 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 GARNL3Q5VVW2 1013 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 LRRN4CLQ8ND94 238 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 ABHD11Q8NFV4 315 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 OR2Y1Q8NGV0 311 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 UHMK1Q8TAS1 419 aaKnown RBP17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 ADAMTS17Q8TE56 1095 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 SLC5A11Q8WWX8 675 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 NEIL2Q969S2 332 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 KIAA1191Q96A73 305 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 FKBP10Q96AY3 582 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 PTERQ96BW5 349 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 RHBDF1Q96CC6 855 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 TSNARE1Q96NA8 513 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 NMRAL1Q9HBL8 299 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 TLK1Q9UKI8 766 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 CDC14AQ9UNH5 594 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 ACOT9Q9Y305 439 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 IKBKGQ9Y6K9 419 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 FER1L5A0AVI2 2057 aa17.1■□□□□ 0.33
PDLIM2-206ENST00000409141 HMX2A2RU54 273 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 P2RX6O15547 441 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 LCMT2O60294 686 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 INHBAP08476 426 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 LTA4HP09960 611 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 OTX2P32243 289 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 SLC26A3P40879 764 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 BCL6P41182 706 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 GDF5P43026 501 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 FOXL2P58012 376 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 MEF2AQ02078 507 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 C18orf21Q32NC0 220 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 COX15Q7KZN9 410 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 RAB43Q86YS6 212 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 OR4K1Q8NGD4 311 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 SLC44A1Q8WWI5 657 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 L2HGDHQ9H9P8 463 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 CD274Q9NZQ7 290 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 RNF112Q9ULX5 631 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 KCNE2Q9Y6J6 123 aa17.09■□□□□ 0.33
PDLIM2-206ENST00000409141 MDC1Q14676 2089 aaKnown RBP17.08■□□□□ 0.33
PDLIM2-206ENST00000409141 A0A087WUV0 522 aaPredicted RBP17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 ARGFXA6NJG6 315 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 OR1F1O43749 312 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 C1QL1O75973 258 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 DLG1Q12959 904 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 NKG7Q16617 165 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 NDUFA9Q16795 377 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 CDKL4Q5MAI5 379 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 VN1R4Q7Z5H5 301 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 CCDC91Q7Z6B0 441 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 TCAIMQ8N3R3 496 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 TBC1D19Q8N5T2 526 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 MFSD9Q8NBP5 474 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 CAMKVQ8NCB2 501 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 STAG3L4Q8TBR4 150 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 SLC13A3Q8WWT9 602 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 MVB12AQ96EY5 273 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 MACROD1Q9BQ69 325 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 SLC26A1Q9H2B4 701 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 ALG9Q9H6U8 611 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 WDR54Q9H977 334 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 SNX15Q9NRS6 342 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 WWOXQ9NZC7 414 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 TUBD1Q9UJT1 453 aa17.08■□□□□ 0.32
PDLIM2-206ENST00000409141 A0A087X1B8 175 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 POC1B-GALNT4F8VUJ3 575 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 PRPF4O43172 522 aaKnown RBP eCLIP17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 RFPL1O75677 317 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 WDR47O94967 919 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 S100BP04271 92 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 C2P06681 752 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 TFEBP19484 476 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 FBLP22087 321 aaKnown RBP17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 TYK2P29597 1187 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 MSH2P43246 934 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 KCNC1P48547 511 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 PMS2P54278 862 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 OCA2Q04671 838 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 C19orf57Q0VDD7 668 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 SULT1C3Q6IMI6 304 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 ASPGQ86U10 573 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 ISCA2Q86U28 154 aa17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 APLFQ8IW19 511 aaPredicted RBP17.07■□□□□ 0.32
PDLIM2-206ENST00000409141 ZNF843Q8N446 348 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms