RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 TRIOBPQ9H2D6 2365 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 PRAMEF26H0Y7S4 382 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 BCKDKO14874 412 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 CHST10O43529 356 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 MSX2P35548 267 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 CAPGP40121 348 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 RPS15AP62244 130 aaKnown RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 HERC3Q15034 1050 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 MAPK14Q16539 360 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 SLC22A15Q8IZD6 547 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 CSNK1A1LQ8N752 337 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 KBTBD8Q8NFY9 601 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 SNX33Q8WV41 574 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 LPGAT1Q92604 370 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 LENG8Q96PV6 779 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 SH3GL3Q99963 347 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 POPDC3Q9HBV1 291 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 MRPL39Q9NYK5 338 aaKnown RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 H7C0S8 307 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 SLC22A2O15244 555 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 F7P08709 466 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 DSTNP60981 165 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 SIM2Q14190 667 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 PM20D1Q6GTS8 502 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 GIPC3Q8TF64 312 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 FAR1Q8WVX9 515 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 NMD3Q96D46 503 aaKnown RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 CD244Q9BZW8 370 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 FBRSL1Q9HCM7 1045 aaKnown RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 STX16-NPEPL1H3BU86 382 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 STX16O14662 325 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 MAFKO60675 156 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 SNX4O95219 450 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 PRAMEF12O95522 483 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 HBQ1P09105 142 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 GP1BBP13224 206 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 RNH1P13489 461 aaKnown RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 ANPEPP15144 967 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 GDF5P43026 501 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 DNASE1L1P49184 302 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 SPINT3P49223 89 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 ABATP80404 500 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 HHEXQ03014 270 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 KLHL26Q53HC5 615 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 TRAF7Q6Q0C0 670 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 C7orf57Q8NEG2 295 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 VN1R2Q8NFZ6 395 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 SHKBP1Q8TBC3 707 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 AP3S1Q92572 193 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 RNF31Q96EP0 1072 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 ZNF347Q96SE7 839 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 DEFB126Q9BYW3 111 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 FAM192AQ9GZU8 254 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 SMURF2Q9HAU4 748 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 HEBP1Q9NRV9 189 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 HSFX1Q9UBD0 423 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 PRODH2Q9UF12 536 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 CDH22Q9UJ99 828 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 TESMINQ9Y4I5 508 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 CASP8AP2Q9UKL3 1982 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 LOC730098B7Z3J9 87 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 TRIM3O75382 744 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 MYCLP1P12525 358 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 TNFRSF4P43489 277 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 KCNC1P48547 511 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 TAB1Q15750 504 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 HNRNPA1L2Q32P51 320 aaKnown RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 FAM78AQ5JUQ0 283 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 FAM26DQ5JW98 314 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 KIAA0319Q5VV43 1072 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 NCEH1Q6PIU2 408 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 FRRS1Q6ZNA5 592 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 PNPLA2Q96AD5 504 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 ARMC5Q96C12 935 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 ZNF689Q96CS4 500 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 KCNC2Q96PR1 638 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 PLEKHG4BQ96PX9 1271 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 ZNF717Q9BY31 904 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 RBCK1Q9BYM8 510 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 HHATLQ9HCP6 504 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 PNPLA3Q9NST1 481 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 DHRS7Q9Y394 339 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 MED31Q9Y3C7 131 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 ASCC3Q8N3C0 2202 aaKnown RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 LAMB2P55268 1798 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 ZNF860A6NHJ4 632 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 CXorf49A8MYA2 514 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 TMX2-CTNND1H3BSU7 103 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 PLK4O00444 970 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 TP73O15350 636 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 CAPN5O15484 640 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 OR1I1O60431 355 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 ENTPD5O75356 428 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 CDC123O75794 336 aaPredicted RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 SRCP12931 536 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 TMED10P49755 219 aaKnown RBP4.83□□□□□ -1.64
HDAC9-204ENST00000406451 RAB28P51157 221 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 CHN2P52757 468 aa4.83□□□□□ -1.64
HDAC9-204ENST00000406451 ZNF234Q14588 700 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms