RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 MFSD7Q6UXD7 560 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 NBPF5PQ86XG9 351 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 ELMOD2Q8IZ81 293 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 LGI2Q8N0V4 545 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 MUC20Q8N307 709 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 ZNF441Q8N8Z8 693 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 EXOC6Q8TAG9 804 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 PRCCQ92733 491 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 TRIM44Q96DX7 344 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 RTP4Q96DX8 246 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 ZNF560Q96MR9 790 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 NAP1L3Q99457 506 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 NDNQ99608 321 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 MAP3K3Q99759 626 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 C1QTNF4Q9BXJ3 329 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 MIS12Q9H081 205 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 LIN28AQ9H9Z2 209 aaKnown RBP4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 PELI2Q9HAT8 420 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 APOBEC3GQ9HC16 384 aaKnown RBP4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 RAB9BQ9NP90 201 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 A4GALTQ9NPC4 353 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 TCF7L2Q9NQB0 619 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 MIS18AQ9NYP9 233 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 ZDHHC2Q9UIJ5 367 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 KCNG2Q9UJ96 466 aa4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 RALYQ9UKM9 306 aaKnown RBP4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 RUVBL2Q9Y230 463 aaKnown RBP4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 STRAPQ9Y3F4 350 aaKnown RBP4.52□□□□□ -1.69
HMGB1P13-201ENST00000406019 A0A087WYN8 130 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 A0A1W2PPI3 338 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 RGSL1A5PLK6 1076 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 C17orf105B2RV13 164 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 NPIPA3F8WFD2 350 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 O00370 1275 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 SOCS5O75159 536 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 REC8O95072 547 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 CDH1P12830 882 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 GP1BBP13224 206 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 CD59P13987 128 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 DGKAP23743 735 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 HSD17B7P56937 341 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 ERVFC1-1P60608 527 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 MBTD1Q05BQ5 628 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 TAF10Q12962 218 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 ZBTB17Q13105 803 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 TSTA3Q13630 321 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 KIR2DS3Q14952 304 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 MAPK11Q15759 364 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 PHKG1Q16816 387 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 UGP2Q16851 508 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 HSP90AB3PQ58FF7 597 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 PM20D1Q6GTS8 502 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 OR4A47Q6IF82 309 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 ZCCHC12Q6PEW1 402 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 CORO6Q6QEF8 472 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 TOM1L2Q6ZVM7 507 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 LAX1Q8IWV1 398 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 NOA1Q8NC60 698 aaKnown RBP4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 ANKRD20A12PQ8NF67 263 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 HSD17B8Q92506 261 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 WBP2Q969T9 261 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 DTD2Q96FN9 168 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 LMLNQ96KR4 655 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 TSSK2Q96PF2 358 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 MYCBPQ99417 103 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 RTP3Q9BQQ7 232 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 ZMYND12Q9H0C1 365 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 EBF2Q9HAK2 575 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 TSPAN16Q9UKR8 245 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 CCPG1Q9ULG6 757 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 EXOC6BQ9Y2D4 811 aa4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 MYH14Q7Z406 1995 aaKnown RBP4.51□□□□□ -1.69
HMGB1P13-201ENST00000406019 NPHP3Q7Z494 1330 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 A0A1W2PN81 502 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 ANKDD1BA6NHY2 528 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 C2CD4DB7Z1M9 353 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 TLR4O00206 839 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 SYNGR3O43761 229 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 PRDM1O75626 825 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 TRIM16O95361 564 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 BAG3O95817 575 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 GUCA1CO95843 209 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 SP9P0CG40 484 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 KRT3P12035 628 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 ETS1P14921 441 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 ACP1P24666 158 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 KIF5BP33176 963 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 CHRNA7P36544 502 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 SMSP52788 366 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 POLR2FP61218 127 aaKnown RBP4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 SLC34A1Q06495 639 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 IZUMO4Q1ZYL8 232 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 KIF19Q2TAC6 998 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 ASPRV1Q53RT3 343 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 STXBP5Q5T5C0 1151 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 C12orf60Q5U649 245 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 BTN2A1Q7KYR7 527 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 PLD3Q8IV08 490 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 HSCBQ8IWL3 235 aa4.5□□□□□ -1.69
HMGB1P13-201ENST00000406019 BATF2Q8N1L9 274 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms